Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq29598 100 3e-16 >seq29598 Length=358761 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || || || | || ||||| |||||||| || || || ||| | |||||||| Sbjct 199815 TGGTATGCCATCATCGAGTCCCAGACAGAGACTGGTACCCCTTACATGGTCTACAAGGAC 199756 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 |||||||||||||||||||||| | || ||||| || |||||| || ||||| || Sbjct 199755 CATTGTAACAAGAAGAGTAACCAACAAAACTTGGGCACCATCAAGTGCAGTAATCTGTGT 199696 Query 75998 ACGGAAATTTTAGAGTAC 76015 || || || |||||||| Sbjct 199695 ACAGAGATCGTAGAGTAC 199678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596331740243360