Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq8724 98.7 3e-15 >seq8724 Length=135301 Score = 98.7 bits (108), Expect = 3e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 ||||||| || || || ||||| |||||||| ||||| |||| || ||||| || || Sbjct 62283 ACCAGTTTCAGCAGTCTTGACAGCAGTATCAATGAGACCTTCACGCCCTCCCATGGCGTG 62224 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 |||||| | ||| ||| ||| || ||| ||||| |||| || || || | Sbjct 62223 GAAGAACATCTCGGACGGCGTTAGACCGGCAAGGTAGGAGTTCTCTACAAAGCCTCTGCT 62164 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||| || || |||| |||| | ||||| |||||||| | || | || | || Sbjct 62163 CTCTGGACCATAGTCGTCCTTGATGAAGTGAGGCAGGGTGCGGTGACGGAAACCAAAGGG 62104 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCA 302818 ||| ||||| || |||||||||||||| |||| Sbjct 62103 GATTCGCTTACCCTCAACGTTCTGCTGACCCA 62072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471216097123289