Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq24410 102 7e-17 >seq24410 Length=609155 Score = 102 bits (112), Expect = 7e-17 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||||||||| || || |||| |||| | || |||||| ||| |||||| Sbjct 405580 GTCTCGGGGTTGTCACACTCGGGGCACAGCACATATTTCTTGATGAAGATATCTAGCAGG 405521 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| | ||| || ||||| || || ||||| || | || || |||| Sbjct 405520 TCCTGAAGCTTGTTAGCGTCATGCGAGCCATTTACAATGAAGCGATTATTCTTAAAATCA 405461 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 | ||| ||||| ||||| ||||| || || || ||||||| |||| Sbjct 405460 AACTGGGTTTGAGCGCCAAGCTCACAGCCAAAAAACTTTGTAGGGT 405415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412681110021221