Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_025427.1 Length=54506 Score E Sequences producing significant alignments: (Bits) Value seq21767 105 2e-18 >seq21767 Length=333 Score = 105 bits (116), Expect = 2e-18 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 37154 GTCGATCGGGCCGAGCGCCGGCTCATGCGATACCCAGATGACGGCGGCCGGGATCTCATG 37213 ||||| ||| || ||| ||||||| ||||| |||| | |||||||||| | | | Sbjct 224 GTCGACCGGCCCCAGCAGCGGCTCACACGATAGCCAGCGAATGGCGGCCGGGGTAGCGAG 165 Query 37214 CAGAACAGGAAGCCGCTCGTCGGCGCGCTTCTGATCTTCGACCGAGACGCCAAGCCAGAC 37273 ||| | || | ||||||| ||| || ||||||||||||||||| || ||| |||||| Sbjct 164 CAGGTCGGGCACGCGCTCGTTGGCCCGTTTCTGATCTTCGACCGACACTCCATTCCAGAC 105 Query 37274 GTTGGGGAGCGGC 37286 ||||||||||||| Sbjct 104 GTTGGGGAGCGGC 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 174231580099752