Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015
-03-10] 31,897 sequences; 990,915,289 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq26231 86.0 6e-12
>seq26231
Length=1354672
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/209 (70%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||||||||| | ||||| || || | ||||| || | ||||| |||| ||||| ||
Sbjct 552055 CAACATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTCGA-GC 552113
Query 25231 CAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289
||| || | |||||| | ||||| || || || ||||| || || || ||||
Sbjct 552114 CAAGTGACTCCATCGAGAACGTAAAGGCCAAGATCCAGGACAAAGAAGGCATCCCTCCCG 552173
Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349
||||||| | ||||| | || ||||| ||||| ||||||| | | | || || |
Sbjct 552174 ATCAGCAGCGTCTCATCTTCGCTGGCAAGCAACTTGAAGATGGCCGCACTCTCTCAGACT 552233
Query 25350 ACAATATTCAAAAAGAATCCACCATTCAT 25378
|||| || || || || ||||| |||||
Sbjct 552234 ACAACATCCAGAAGGAGTCCACACTTCAT 552262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444916935299040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |