Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_027334.1 Length=47800 Score E Sequences producing significant alignments: (Bits) Value seq21767 100 9e-17 >seq21767 Length=333 Score = 100 bits (110), Expect = 9e-17 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 31608 GTCCACCGGCCCGAGCAGCGGCTCGGCCGAAACCCAGCGCACCGCCGCCGGCGTGTCGAG 31667 ||| |||||||| ||||||||||| ||| | |||||| | || ||||| || |||| Sbjct 224 GTCGACCGGCCCCAGCAGCGGCTCACACGATAGCCAGCGAATGGCGGCCGGGGTAGCGAG 165 Query 31668 AAGAACCGGGATGCGCTCATTGGCGCGGGTCTGATCTTCGACAGAGACGCCGAGCCAGAC 31727 || | || | |||||| ||||| || ||||||||||||| || || || |||||| Sbjct 164 CAGGTCGGGCACGCGCTCGTTGGCCCGTTTCTGATCTTCGACCGACACTCCATTCCAGAC 105 Query 31728 GTTAGGCAGGGGCCATGC 31745 ||| || || |||||||| Sbjct 104 GTTGGGGAGCGGCCATGC 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152780508348468