Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq29598 93.3 6e-14 >seq29598 Length=358761 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 76301 ACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTT 76360 ||||||| |||| ||| || | || ||||| || || |||||||| |||||||| || Sbjct 199661 ACCTCATCAGCACTGGAGTACTCTACGATCTCTGTACACAGATTACTGCACTTGATGGTG 199720 Query 76361 CCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTT 76420 || | ||||||||||| ||||| |||||||| |||||| || | | | || || Sbjct 199721 CCCAAGTTTTGTTGGTTACTCTTCTTGTTACAATGGTCCTTGTAGACCATGTAAGGGGTA 199780 Query 76421 CCAGTTTCAATCTGTGATTCGATAAT 76446 ||||| || |||| || ||||| || Sbjct 199781 CCAGTCTCTGTCTGGGACTCGATGAT 199806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712650144143040