Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylocentrotus_20purpuratus_20[refseq_20GCF_5F000002235.4_202015 -03-10] 31,897 sequences; 990,915,289 total letters Query= NC_031098.1 Length=40749 Score E Sequences producing significant alignments: (Bits) Value seq26110 80.6 7e-11 >seq26110 Length=72620 Score = 80.6 bits (88), Expect = 7e-11 Identities = 80/104 (77%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 39301 GTGACGAACTATTTAAATAAAAACCATGCAGAAGCGGCAATTGAAGGGAAGCCTTTAGTC 39360 || || |||| | | ||| || ||||| | || || | |||||||||||| ||||| Sbjct 54338 GTAACTAACTTTCTTAATGTGAATCATGCTAAGGCAGCGAATGAAGGGAAGCCGTTAGTT 54279 Query 39361 GTATTGATTGCACCGCAAGAGAAAGACAGATCTAAGGCTCAGAA 39404 |||||||| ||||| ||||||||||| | || |||||||| || Sbjct 54278 GTATTGATCGCACCACAAGAGAAAGATCGTTCGAAGGCTCAAAA 54235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130225854766854