Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3622 149 6e-31 >seq3622 Length=296610 Score = 149 bits (164), Expect = 6e-31 Identities = 310/457 (68%), Gaps = 26/457 (6%) Strand=Plus/Minus Query 16673 CTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTC 16732 ||||| || || | ||||| ||||||||||| || ||||| || || | || || Sbjct 278640 CTTTGATATTCCCCGACGCGCTTTTCGAAAAAATTTGTTTTTCCTTCCATTGAGATCAGA 278581 Query 16733 TCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTT---------AGAGTAC---- 16777 ||||||||||| || ||||| ||| |||| || | | ||||||| Sbjct 278580 TCCATGAAATCGAATGGATTTTCAGCATTGAAGATCTGGTGTAAAAAAAAGAGTACTTTA 278521 Query 16778 ------CCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACAT-TAA 16830 || || | || | | ||| || ||||| || ||||||| |||||| | | Sbjct 278520 TCGAAACCAAGGGCCAACATGAGGCGATCAGCGACAAACTCAATATATTTGCACATCTCA 278461 Query 16831 TTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTAT 16890 | ||| |||||||| || | || || || || ||||| |||||||| || || || Sbjct 278460 ATGGCA-TTCATTCCGATCAAACTCACAGGTAGTGCTTCAGTCAAAAACTCTTTTTCGAT 278402 Query 16891 AACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGT-ATGTTTAAGAT 16949 |||| || ||| |||||| || ||| | | || ||| | | | |||| || Sbjct 278401 TTCAACTGCATCCACAATAATTCTTTGAACCAGAGATTGTGATGGTTTCACGGTTAA-AT 278343 Query 16950 GTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGT 17009 | ||||||||| ||||||||||| ||| | |||||| || |||||||| ||||| | Sbjct 278342 GACTAAACATCAAGCATGCGAAATCAGTATGAAGTCCCTCATCCCTGCTGATGAGTTCAT 278283 Query 17010 TAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACG 17069 || || | ||| || ||||| || || || ||||||||||| || || || || | Sbjct 278282 TACTGAAGGCCAAGCCAGGCATTAAACCACGCTTTTTTAACCAAAAAATGGCAGCAAATG 278223 Query 17070 ACCCAGAAAAGAATATACCCTCGACGGATGCAAACGC 17106 | ||||||||||| || || ||||| || ||||| || Sbjct 278222 AACCAGAAAAGAAAATTCCTTCGACAGA-GCAAAGGC 278187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517508356124760