Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3622 105 7e-18 >seq3622 Length=296610 Score = 105 bits (116), Expect = 7e-18 Identities = 214/311 (69%), Gaps = 5/311 (2%) Strand=Plus/Minus Query 16036 ATCTGCTACAAATTCTATATATTGACACAT-TAAGTCGCAATTAATTCCTATAAGTCGTA 16094 ||| || ||||| || ||||||| ||||| | | | ||| || ||||| || | | | Sbjct 278494 ATCAGCGACAAACTCAATATATTTGCACATCTCAATGGCA-TTCATTCCGATCAAACTCA 278436 Query 16095 CCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGG 16154 | || || |||| || ||||| | || ||| || |||| || || ||| || || Sbjct 278435 CAGGTAGTGCTTCAGTCAAAAACTCTTTTTCGATTTCAACTGCATCCACAATAAT-TCTT 278377 Query 16155 TGGCTC-GTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCG 16213 || | | | || || ||| | | ||| || ||||||| | || ||||| || Sbjct 278376 TGAACCAGAGATTGTGATGGTTTCACGGTTAAATGACTAAACATCAAGCATGCGAAATCA 278317 Query 16214 CAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTT 16273 ||| ||||| || || |||||||| ||||| || || | || || |||||| Sbjct 278316 GTATGAAGTCCCTCATCCCTGCTGATGAGTTCATTACTGAAGGCCAAGCCAGGCATTAAA 278257 Query 16274 CCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACA 16333 || || || |||||||| || || ||||||||||| || |||||||| || || || ||| Sbjct 278256 CCACGCTTTTTTAACCAAAAAATGGCAGCAAATGAACCAGAAAAGAAAATTCCTTCGACA 278197 Query 16334 GATGCAAAAGC 16344 || ||||| || Sbjct 278196 GA-GCAAAGGC 278187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511377597341240