Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_001895.1 Length=33593 Score E Sequences producing significant alignments: (Bits) Value seq4128 755 0.0 >seq4128 Length=11080 Score = 755 bits (836), Expect = 0.0 Identities = 1087/1518 (72%), Gaps = 26/1518 (2%) Strand=Plus/Plus Query 24398 AGGGGCTTTCAACGGTACAATGCGGGTTTGAGCGGCATAAATTACCACTGAAAGCCCTTA 24457 ||||||||||||||||||||||||| ||| |||||| | |||| |||||||| | | Sbjct 649 AGGGGCTTTCAACGGTACAATGCGGAGTTGCGCGGCACGCAAGACCATTGAAAGCCATAA 708 Query 24458 AACGTTACTCTACTGTGGACACTGTGTGGACACTCTCGGCCTCAGTACCACCTCTTAGCG 24517 |||| | ||||||||| | ||||||| | | |||| | |||||| |||| Sbjct 709 CTAATTACCCATCTGTGGACATTATGTGGACGTTTCACACATCAGCGCTACCTCTCAGCG 768 Query 24518 GATTAAGAGAAATGGCGTCCTGAAGGTACTCTGGCGCAAAATGAGCGTAAACCATAGTTT 24577 | ||||| || || ||||||||||| || || || ||||| |||||||| ||||||||| Sbjct 769 GGTTAAGCGAGATCGCGTCCTGAAGATATTCAGGTGCAAAGTGAGCGTAGGCCATAGTTT 828 Query 24578 GCTCAATCCGCGTGTGACCTAGTATCCGTTGTAGCGTGATAATACTTCCTCCATTAATCA 24637 ||||||| |||| || |||| |||| |||| || || || || || |||||||||| Sbjct 829 GCTCAATTCGCGCATGTCCTAAGATCCTCTGTAATGTAATTATGCTCCCCCCATTAATCA 888 Query 24638 TGAAATGAGTGGCAAAGCTGTGCCTTAGTGCATGTGTGGCTTGCCCCATTGGCAAATCCG 24697 | ||||| || || || ||||| | ||||||||| || || || || | || | ||| | Sbjct 889 TAAAATGCGTCGCGAAACTGTGGCGTAGTGCATGCGTCGCCTGGCCGGTCGGAAGATCAG 948 Query 24698 GTTTTATTGCTTTCATTGTTCGTCTGAAGCGAGGGTAATCAGCATCAGGGAATAAAAAAC 24757 |||||| | | | | | | |||||| || ||| || | | ||||| || | Sbjct 949 GTTTTACCTCCCTGAGTATCTGCCTGAAGTCAGAATAAGACGCCTTACCAAATAACAACC 1008 Query 24758 CTCGTTTGTTATCCGCGATCATTTTGGCAACAGCCTCTGAGATCGGGACGGTGCGTGGTT 24817 |||| || |||||| || | ||| || || || |||| | || || || || | | Sbjct 1009 CTCGCTTACCATCCGCTATGAGTTTTGCCACTTCCGCTGAAACTGGAACAGTCCGCTGCT 1068 Query 24818 TGTTTGTTTTCGTTTTAACAAACGTGACGCGGTTATGGATGATATTTTCTGCTTTCAAAC 24877 |||| | || |||||||| ||||| || ||||| || ||||| | ||| || || | | Sbjct 1069 TGTTACTCTTGGTTTTAACGAACGTCACACGGTTCTGTATGATGTGTTCCGCCTTGAGTC 1128 Query 24878 GAGCTGCTTCTCCCCAACGTGCTCCTGTACTCAGGCAAAGAATCGCAATCTTTTTATTGT 24937 |||| ||||| ||||| || || || ||||| | || |||| || ||||| || |||| Sbjct 1129 GAGCCGCTTCGCCCCAGCGAGCACCAGTACTTAAACACAGAACAGCTATCTTCTTGTTGT 1188 Query 24938 CGCCGTCAAGTGCTGCAAGCAGTAAG-GC--AATTTCTTCCTGTGTTAGATAGCCTGTTT 24994 |||| || ||| | ||| || ||| || ||||| |||| ||| |||||||| |||| Sbjct 1189 CGCCATCCAGT--TTAAAG-AGCAAGTGCTTGATTTCGTCCTCTGTCAGATAGCCAGTTT 1245 Query 24995 CTGGTTTTTCCTCCTTAAGCCTTTTTGTCCCTCTGATAGGGTGCTCACCAAAGAATAACT 25054 |||| ||| || || | | | || ||||||||| || || ||||| | || |||| Sbjct 1246 CTGGAACTTCTTCTTTCAACTTCTTCCGCCCTCTGATCGGATGTTCACCCGAAAACAACT 1305 Query 25055 CCGCTTCAATCAGGGCTGTAAACATGCCGCTAATACATGTT-AAATCACGATTGATACTC 25113 | || || || || ||||| ||||| || || |||| |||| | ||| || || || | Sbjct 1306 CGGCCTCGATAAGCGCTGTGAACATACCACTGATAC-TGTTGAGATCGCGGTTAATGGTG 1364 Query 25114 GAAGGTTTAATACCCTGACTTCTTCGGGTGGCGCAGTACTGGCTGATAAGCGATTTCGTA 25173 |||| |||||||||||| ||||||| | ||| | ||||| || || |||| ||||||| Sbjct 1365 GAAGCTTTAATACCCTGGCTTCTTCTTGCCGCGTAATACTGACTAATCAGCGCTTTCGTA 1424 Query 25174 ATTTGAAATGCGCATGGGTCATTCGTTATTTTTGTGAAGATTTC-AATTTTTCCAAGATT 25232 || ||||| || || || || | || || | || | || || || | | || Sbjct 1425 ATCTGAAAAGCACAAGGATCGTCTGTAATCCTGCAAAACACGTCTAACTTGTTGCGGTTT 1484 Query 25233 AGATTTC--CCATGCTCTTCGTGTTTACCCTTTAAATCCCACCAGATCTGTGTCAGCTCC 25290 | | | || ||||| || || || || || |||| |||||| | |||| |||| || Sbjct 1485 A---TCCGACCGTGCTCCTCATGCTTGCCTTTCAAATTCCACCAAAGCTGTATCAGTTCA 1541 Query 25291 GACAGACGTCGCTTGTCTGTTGGTTTTGATAGCCATTCTTTATTGTGGTGGTTGTACAAC 25350 |||||| | ||||| || || |||||||||| ||||||||| |||| |||||| || Sbjct 1542 GACAGATGCCGCTTATCCGTCGGTTTTGATAACCATTCTTTGGTGTGATGGTTGAACTGG 1601 Query 25351 GTGTATTTCTCGAAAGCGACAGCTTCGCTTTTCTTATCAAACTTCCTACGGATGCGTTTT 25410 || | ||||||||||| | ||||| |||||||||||||||||||| ||||| || ||| Sbjct 1602 GTATGCTTCTCGAAAGCTGCCGCTTCACTTTTCTTATCAAACTTCCTGCGGATACGCTTT 1661 Query 25411 CCATTACGTCCAGTAGGGCGGATGTCCACTTCATATCGACCATCATCGAGTTTTTTGATT 25470 ||||| || |||| ||| | |||||||||| |||||||||||||||||||||| || || Sbjct 1662 CCATTGCGACCAGCAGGCCTGATGTCCACTCCATATCGACCATCATCGAGTTTCTTAATA 1721 Query 25471 GCCATCAGAAAACCCTCCGAGTGGTGTGttt--ttttGCGACTACTAATCGCTTT----T 25524 | ||| |||||||||||||| |||| |||| ||| | || ||| ||| || | Sbjct 1722 GTCATAAGAAAACCCTCCGATGGGTGCGTTTGCCTTTAGGCCT--TAA-CGCGTTGCAAT 1778 Query 25525 TTCGTGGTGGCTGAAATTTAGCCACCAATAGTAGGCACTTGTGATGAATATATTCACGAT 25584 | ||| || | | || | ||||||| ||| || ||| ||| || || | | | Sbjct 1779 TATGTGATG---AATACTTTTCGACCAATAATAGACATTTGAAATGTATGTAAGCCTGGT 1835 Query 25585 GAATTGTTAACCAGTCTTTTGACCGGAGTGGGGCGACGTTGTTTCGTTTTGCCCAAAGTG 25644 |||||||||||||||||||| | ||||| |||| |||||| || |||||||||||| Sbjct 1836 TAATTGTTAACCAGTCTTTTGGTCTGAGTGCTGCGAGGTTGTTAAGTCTTGCCCAAAGTG 1895 Query 25645 TGCGAGAGCGGGCGCAATTTGCCCGGACTCAGGAGCGATCTGATTGGTCATGAACCATAA 25704 |||||| || || || ||||| ||||| ||||| | | ||||| |||||| ||||| | Sbjct 1896 TGCGAGGGCCGGTGCGATTTGACCGGATTCAGGGGACACCTGATCGGTCATAAACCAAAG 1955 Query 25705 AGTGTATTTGGTGAATTGTGGGGTCTGCAGGATGTTCATCATGACATCTGTTGGAGGTGT 25764 || |||||| || | | ||| || || || |||||| | || || || ||| | Sbjct 1956 AGCGTATTTACAGAGTCGGGGGTGTTGGAGAATTTTCATCGCTATGTCGGTCGGGGGTAT 2015 Query 25765 TGAACGACCACTTTCATAGTAACTCAGCGTGCCATACGGAACCCCTGTTAAATCAGCAAG 25824 | | || |||||||| || | || | || || ||||| ||||| | ||||||| Sbjct 2016 GGTCCTTCCGCTTTCATAATATGTGAGTGAGCTGTAAGGAACTCCTGTAATTTCAGCAAA 2075 Query 25825 TTGTTGTCTGCTCAAATACTCTGATTTTCGCATTAAGACTATCTTCTCGCTTATCGTGTT 25884 ||| | |||| | | ||| || | || || || | | |||||| || || | | Sbjct 2076 TTGCTTTCTGTTAAGTCTCTCGGACTCGCGAATCAACGCAAGCTTCTCACTAATAGCTGT 2135 Query 25885 TGACATGGTGTTTAGATC 25902 ||||||| | | ||||| Sbjct 2136 TGACATGTTATCAAGATC 2153 Score = 192 bits (212), Expect = 1e-44 Identities = 190/246 (77%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 26032 GATGCGATTCCTTATCAGGAGTTCGCAAAACTAATAGGAAAATCGACAGGAGCGGTTCGT 26091 ||||| || || ||||||||||| || ||| | || || ||| | | | ||| || | Sbjct 2290 GATGCCATCCCGTATCAGGAGTTTGCGAAAATTATTGGTAAAACTCCGGCAGCCGTAAGA 2349 Query 26092 CGGATGATCGATAAAGGAAAGCTGCCTGTAATTGATATGACCGATCCACAATCAGCTTCA 26151 | |||||||| ||||| ||||| |||||||| || ||||||||||| || || |||| Sbjct 2350 GGAATGATCGAGAAAGGGAAGCTTCCTGTAATCGAGATGACCGATCCCCAGTCTACTTCT 2409 Query 26152 GGTCGTGCAGGTGAATATTGGGTATACCTTCCGGCATGGAATAACGGACTAAAACTGGCT 26211 || ||||| || || || ||||| |||||||| || ||||| ||||| | |||||||| Sbjct 2410 GGCCGTGCGGGCGAGTACTGGGTTTACCTTCCAGCCTGGAACAACGGCATGAAACTGGCC 2469 Query 26212 TATGAAAGCCGCCCTAAAGAGATTCGTGACGGCTGGTTGATGTGGTTAGGTCTCGGTGAA 26271 || ||||| || ||||| ||||| | || || |||||||||||| | ||||| |||||| Sbjct 2470 TACGAAAGTCGTCCTAAGGAGATCAGGGAAGGTTGGTTGATGTGGCTTGGTCTTGGTGAA 2529 Query 26272 CCACGT 26277 ||| || Sbjct 2530 CCAGGT 2535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107368659306870