Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq2570 421 2e-113 >seq2570 Length=4711 Score = 421 bits (466), Expect = 2e-113 Identities = 767/1120 (68%), Gaps = 2/1120 (0%) Strand=Plus/Minus Query 23158 CTCCCAACGAGGTTTGATTAGATCTTCGAAAATTTCTTTGCAGACTGGCTCCCAGATTTC 23217 |||||| || ||||| || ||| || ||||| || ||||| || || |||||||| Sbjct 1619 CTCCCAGCGTGGTTTAATCAGACGATCAAAAATCTCATTGCAAACAGGTTCCCAGATAGA 1560 Query 23218 CACTGCATTTCGCCAGGCATTAAGCGTTGAGCGTTGATTTGCTGCTTGCTCAAATACGGT 23277 | || || |||||||| | || ||||||| || || ||||| ||||| Sbjct 1559 GAGGGCGTTACGCCAGGCGCCGGTTGAAGAACGTTGATCAATAGCCTGTTCAAAAACGGT 1500 Query 23278 GCGCATCTTGATCTGGCCTTTACCAACTTCATCAGTGACCCGCACGACCTGTCGCAAGAC 23337 | ||| |||||| |||||||| |||||||| || | || || || | | || || Sbjct 1499 TCTCATACGGATCTGACCTTTACCGACTTCATCGGTTTCACGTACAACATTTTTCAGAAC 1440 Query 23338 CATAGCTCCCCAGGTATTTCGAATCTGCTCCTCCATCCACCGGGACTGATTGCCGTTAGT 23397 |||| |||||||| || ||||| || || ||||||||| ||||||| ||||||| | Sbjct 1439 CATACTTCCCCAGGCATCCCGAATTTGTTCTTCCATCCACGGGGACTGCGAGCCGTTATT 1380 Query 23398 AAGGCTGTATTTGGTCAGGAGCAGGCGGACGACAGGTTCAAAGCCGCCCAAATCGACGGT 23457 | |||||||| || || || | ||||| | || || ||||| | ||| ||| | Sbjct 1379 ATTACTGTATTTAGTAAGCAGAATACGGACATCTGGCTCGAAGCCTTTAAGATCCACGTT 1320 Query 23458 TTCAAGCAGGTCGAGCAGCATGGTGAAAAACTGAAGAACTGATGCATAGTCGAACAGCTC 23517 | |||||||||| | ||||| ||||||||| || | || | |||||||||||||| Sbjct 1319 CTTAAGCAGGTCGCGAAGCATATCGAAAAACTGCAGTGCGGAGGTGTAGTCGAACAGCTC 1260 Query 23518 TGCAGGGGTTGCTACCACGATGACGTCAGCAGCACAGACAACGTTAATAGTTCCCGTACC 23577 ||| || || | || | | || ||||||||||| ||||| || || || || |||| Sbjct 1259 TGCCGGAGTAGGGACAATCAGTACATCAGCAGCACATACAACATTTATCGTACCGATACC 1200 Query 23578 CAAGTTTGGCGCGCTGTCTATGACGATAATGTCGTAGTTATCCCATACAGACTCGATAGC 23637 | ||| || |||||||| || || || | ||| || | || |||| || || || Sbjct 1199 AAGGTTGGGTGCGCTGTCGATAACTATCACGTCATAATCATGAGCGACAGTTTCAATGGC 1140 Query 23638 AGCACGAAGCATCAGATGAGGGGGATGAGGTAGCTTCCCCTCGGAATGGTACTGCATCAG 23697 ||| |||||||| || ||| | ||||| || || ||| | | | |||||| Sbjct 1139 CAGACGGAGCATCAGGTGCGGGTCAGCAGGTAATTTGCCTTCGTCAAATTTCCCCATCAG 1080 Query 23698 ATCTGTTTCAATGCGGTGAAGGGCCAGGCAGCTGGGGATTATGTCGAGACCCGGCCAGCA 23757 || |||||||||||||| || ||||| ||| ||||| || || || || |||||||| Sbjct 1079 CTCGGTTTCAATGCGGTGCAGTGCCAGACAGGACGGGATGATATCAAGGCCAGGCCAGCA 1020 Query 23758 TGTTGGTTTTATCGCATATTCAGCGTTGTCGCGTTTACCC-AGGTAAAATGGAAGCAGTG 23816 || || ||||| || || |||| || | ||| ||| || ||||| || || || | Sbjct 1019 GGTGGGCTTTATAGCGTAGCTGGCGTCATC-CTTTTCCCCAAGATAAAAGGGCAGGAGAG 961 Query 23817 TATCGTCTGCGTGAATGTGCAAATCAGGAACGTAACCGTGGTACATAGATGCAGTCCCTT 23876 | || || || ||||| || | ||| || || | ||||| |||||||| ||||| || | Sbjct 960 TGTCCTCAGCATGAATATGAAGATCGGGCACCCATCCGTGATACATAGAAGCAGTTCCCT 901 Query 23877 GCGGGTCGTTCCCTTCAACGAGTAGGACGCGGTGCCCTTGCAAGGCTAACCATTGCGCCT 23936 | ||||| || |||||||| || || || ||| | |||| || || | || ||| Sbjct 900 GTGGGTCATTGCCTTCAACAAGCAGAACACGGAGTCCTTTCAGAGCAAGATCCTGAGCCA 841 Query 23937 GGTGTACTGCAGATGAGGTTTTATAAACCCCTCCCTTGTGTGACATAACGGAAAGTACAA 23996 |||| || | ||||||||| ||||| || || ||||| | ||| || || Sbjct 840 GGTGAACGGATACTGAGGTTTTGTAAACACCACCTTTGTGAGCAGCAACACCAATCACCG 781 Query 23997 CCGGGTTTTTATCGTCAGGTCTTTGGTTTGGGTTACCAAACACACTCCGCATATGGCTAA 24056 ||| ||| |||| | | | | ||||||| ||| |||||| || | | Sbjct 780 GCGGAAACGCATCTTCAGCACGGCGCAGTCGTGTACCAAATACATCCCGCATGTGATTGA 721 Query 24057 TTTGGTCAATTGTGTAGCCAGCGCGACGTTCTACTCGGCCCCTCATCTCAAAATCAGGAG 24116 |||| || || || || ||| |||| | || |||| || | | || | |||||| Sbjct 720 TTTGCTCGATGGTATAACCAACGCGTTGCTCAACTCTTCCACGGGTTTCCATATCAGGGT 661 Query 24117 CCGGTAGACGACCAGCTTTTTCCGCGTCTCTGATAGCCTGCGGTGTTACGCCGATCAGGT 24176 || || || |||||||| || || || ||||||||||| | || ||||| | | | Sbjct 660 GAGGCAGCCGGCCAGCTTTCTCGGCATCCCTGATAGCCTGAGATGACACGCCAACTAAAT 601 Query 24177 CTGCAACTTCTGTTATACCCCAGCGGCGAGTAATACGACGCGCTTCCGGGCTGTCATCGC 24236 | || |||| || | |||||| || || || || |||||||| |||||||| Sbjct 600 CAGCTGCTTCACCAATCCTCCAGCGCCGGGTTATTTTCCGGGCTTCCGGACTGTCATCAT 541 Query 24237 CGAACTGTGCGATGGCAATAGCGCGCGTCATTTCCTGACC 24276 ||||| || ||||| || || ||||||||| ||||| Sbjct 540 TAAACTGCGCAATGGCGATTGCTTTCGTCATTTCATGACC 501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148268263039858