Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq567 107 2e-18 >seq567 Length=338301 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||||| | |||||||| || || || ||||| ||||| || ||| | Sbjct 137239 CCACCTCTCAATCGAAGAACCAAGTGGAGAGTAGATTCTTTCTGGATGTTATAATCGCTA 137298 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| |||| | || |||| |||||| ||||| || |||| | |||||| || ||||| Sbjct 137299 AGTGTGCGACCATCCTCCAATTGTTTCCCGGCAAAAATCAGTCTCTGTTGATCAGGAGGA 137358 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || |||||||| ||||| ||| || | | | || || ||| || Sbjct 137359 ATTCCTTCCTTGTCTTGGATTTTAGACTTTACAGTCTCGACAGAATCATTGGGCTCAACA 137418 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||| ||||| ||||| || || || || |||||||||||||| Sbjct 137419 TCAAGGGTGATCGTTTTGCCAGTAAGTGTTTTAACAAAGATTTGCAT 137465 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||||| | |||||||| || || || ||||| || || |||||||| Sbjct 137923 CCACCTCTCAATCGAAGAACCAAGTGGAGAGTAGATTCTTTCTGGATATTATAGTCGTTA 137982 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || |||| | || || ||||| ||||| ||||| || | | ||||||||| || || Sbjct 137983 AGAGTGCGACCATCCTCAAGTTGCTTTCCTGCGAAAATGAGTCTCTGTTGGTCTGGCGGA 138042 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| |||||||| ||| || || || | | | || || || ||| || Sbjct 138043 ATACCTTCCTTGTCTTGAATCTTAGATTTGACGGTCTCGACCGAATCGTCAGGCTCTACA 138102 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | || || || ||||| |||| ||||||||||| || ||||| Sbjct 138103 TCGAGAGTTATAGTTTTGCCAGTCAACGTCTTCACAAATATCTGCAT 138149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395047480165897