Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq567 102 6e-17 >seq567 Length=338301 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 || ||| |||| ||| || || |||||||| || ||||| || ||| | ||| || Sbjct 137250 TCGAAGAACCAAGTGGAGAGTAGATTCTTTCTGGATGTTATAATCGCTAAGTGTGCGACC 137309 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 ||| ||||||||||| || ||| | || ||||| |||||||| || | |||||||| Sbjct 137310 ATCCTCCAATTGTTTCCCGGCAAAAATCAGTCTCTGTTGATCAGGAGGAATTCCTTCCTT 137369 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || |||| ||| || | |||| ||| |||||| |||| |||||| Sbjct 137370 GTCTTGGATTTTAGACTTTACAGTCTCGACAGAATCATTGGGCTCAACATCAAGGGTGAT 137429 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||| || | |||||| ||||| |||||||| Sbjct 137430 CGTTTTGCCAGTAAGTGTTTTAACAAAGATTTGCAT 137465 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18111 CTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAA 18170 ||||| |||| ||| || || |||||||| || ||||| ||||| || || | | Sbjct 137707 CTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCA 137766 Query 18171 TCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTA 18230 ||||| | ||| || || ||| | || ||||| || |||||| ||| | |||||||| Sbjct 137767 TCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTG 137826 Query 18231 TCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 || || | |||||| |||||| |||| |||||| || | ||||| Sbjct 137827 TCCTGGATCTTAGACTTGACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATT 137886 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| || || | |||||| || ||||||||||| Sbjct 137887 GTTTTACCAGTGAGTGTTTTGACGAAAATTTGCAT 137921 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18111 CTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAA 18170 ||||| |||| ||| || || |||||||| || ||||| ||||| || || | | Sbjct 137023 CTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCA 137082 Query 18171 TCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTA 18230 ||||| | ||| || || ||| | || ||||| || |||||| ||| | |||||||| Sbjct 137083 TCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTG 137142 Query 18231 TCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 || || | ||| || |||||| |||| |||||| || | ||||| Sbjct 137143 TCCTGGATCTTAGACTTAACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATT 137202 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| || || | |||||| || ||||||||||| Sbjct 137203 GTTTTACCAGTGAGTGTTTTGACGAAAATTTGCAT 137237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379317383920965