Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq3622 127 2e-24 >seq3622 Length=296610 Score = 127 bits (140), Expect = 2e-24 Identities = 305/458 (67%), Gaps = 30/458 (7%) Strand=Plus/Minus Query 13582 TTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTT 13641 |||||||||| | || | ||||| || || || ||||| ||||||| ||| || | Sbjct 278639 TTTGATATTCCCCGACGCGCTTTTCGAAAAAATTTGTTTTTCCTTCCATTGAGATCAGAT 278580 Query 13642 CCATAAAATCAAATGGATTT-----ATTGACA--------TAAACA--------CTTTAT 13680 |||| ||||| ||||||||| ||||| |||| | |||||| Sbjct 278579 CCATGAAATCGAATGGATTTTCAGCATTGAAGATCTGGTGTAAAAAAAAGAGTACTTTAT 278520 Query 13681 CACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACAT-TAAA 13739 | |||| || | || | | | |||||| | |||||||||||||| |||| | || Sbjct 278519 CGAAACCAAGGGCCAACATGAGGCGATCAGCGACAAACTCAATATATTTGCACATCTCAA 278460 Query 13740 TCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATA 13799 | || ||||| || || | | ||||| | | | || ||||| |||||||| || Sbjct 278459 TGGCA-TTCATTCCGATCAAACTCACAGGTAGTGCTTCAGTCAAAAACTCTTTTTCGATT 278401 Query 13800 GACACAGCCTCTTTTATAATAATTGTAATAATCTCA---TTAGAAGGAGGATATTTTAGA 13856 || || || | ||||||| | || | | | || || ||| | Sbjct 278400 TCAACTGCATCC---ACAATAATTCTTTGAACCAGAGATTGTGATGGTTTCACGGTTAAA 278344 Query 13857 TGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCG 13916 || |||| || || || || |||||| |||||| |||||||| || || || ||||| Sbjct 278343 TGACTAAACATCAAGCATGCGAAATCAGTATGAAGTCCCTCATCCCTGCTGATGAGTTCA 278284 Query 13917 TTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAAT 13976 || || | || || ||||| || || || |||||||||||||| || ||||||||| Sbjct 278283 TTACTGAAGGCCAAGCCAGGCATTAAACCACGCTTTTTTAACCAAAAAATGGCAGCAAAT 278224 Query 13977 GACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 14014 || || |||||||| ||||| || || | |||||| || Sbjct 278223 GAACCAGAAAAGAAAATTCCTTCGACAG-AGCAAAGGC 278187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479693477573800