Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq2570 286 1e-72 >seq2570 Length=4711 Score = 286 bits (316), Expect = 1e-72 Identities = 1123/1750 (64%), Gaps = 51/1750 (3%) Strand=Plus/Minus Query 21703 GCAGTTTTAATACAGCGCATAATGATTTTCCGTGAGATATTCTCAGCTTCAGCTAATTTA 21762 || || ||||||||||| ||||||| || || ||||| || || || || || | | Sbjct 2226 GCCGTATTAATACAGCGGGTAATGATCTTGCGAGAGATGTTTTCCGCATCGGCAAGAGCA 2167 Query 21763 CTTACATTCCCATCAAAATCATTATGCAGACGGCGTGAATAACGTTGGCCGCGCTCAAAT 21822 | ||| ||| |||| ||||| ||||| |||| || |||||| || || ||| | Sbjct 2166 GAAATATTTCCAGCAAACTCATTCTGCAGCCGGCTTGTATAACGCAAACCACGTTCATAA 2107 Query 21823 GCTGATGTAGGTCGGTAATCGTTACCGATTTGCGACAGCCATGCCATTTGCTCTTCGTCT 21882 || || || || ||||||||||| | | | |||| ||||| ||||| ||||| Sbjct 2106 GCACTCGTCGGCCGATAATCGTTACCCAGTCGGGACAATGCAGCCATCTGCTCATCGTCC 2047 Query 21883 AAATCCCCGACAAGGACCCGATAATCTGTTTTTGTAATTATTGCAGTTTTGCGGCGGCGA 21942 | || || || | | |||||||| ||| || | ||||| | ||| ||||| || Sbjct 2046 AGTTCACCAACCAAAATGCGATAATCACTTTCCGTCAGAATTGCGGCTTTACGGCGACGG 1987 Query 21943 CTGCCATCAGCTACTTCTATAACGCCGTTTACTTCGCGGCCATAGGCAGGGTTCTGCTGG 22002 ||||| || || | |||||| || | || ||||||| | || || ||||||| Sbjct 1986 CTGCCGTCTGCAATTTCTATGACATCAGAAACCCGGCGGCCAAATGCTGGAGTCTGCTGA 1927 Query 22003 CCAGATAATTTGAATGAAGGGATCAGGTCATCTAATGCGGTTTCAGTTAGCAACTCTTGG 22062 || | | | || || ||||| || ||||| | || ||| || |||| || || Sbjct 1926 CCGGTCAGTAAAAAAGATGGGATAAGATCATCCAGAGCATCTTCGGTAAGCAGTTCCTGA 1867 Query 22063 TCACGCTCATTCCCGCACCAAACCATTGTGGCCTTATTAACTCTTTCTGCTGGTATGGTT 22122 || |||||||| || |||| || || || | | ||| | ||| | | | | Sbjct 1866 TCGCGCTCATTACCTGACCATACGCGTGAAGCACTCTCAACAGTGTCTCCCCGGAGCACT 1807 Query 22123 TTAAGAACAAAATGAACATCACGGCCACAGACAGAAAGGGTAATCTGATTACCG---GTC 22179 | ||| ||| | || ||||||||||| || | ||| | || ||||||| | | Sbjct 1806 TCAAGGGTAAATTTTACTTCACGGCCACATACCGGAAGAGAGATGGCATTACCGCGAGCC 1747 Query 22180 ATTGCATTAACGCGAGATGTTAACTGTGAAACTGCTGGAGCAGCTGGTTGCCGAGTTACA 22239 || ||| ||||| | |||| |||| | | || | ||| Sbjct 1746 ATGGCACCCACGCGCGCAATTAA---TGAA-----TCCACCATC-GGT------------ 1708 Query 22240 GAGCCAGGCGCTGGGACCGTGGTCGCATTATTCATTTCGATTTTTGGGGCGT-TCTT--C 22296 | | | ||||| || | || | | | || || | | || || | |||| Sbjct 1707 GCGGCCGGCGCCGGTGATGAAGTATCTTCAGTCGATTGAGTATGTGTGGTATGTCTTGGA 1648 Query 22297 ATTACTGGTGCACGTTTCATT-TCAAATTCTCCCAACGCGGCTTAATTAAGCGATTATAA 22355 || || || ||||| |||||| || || ||||||| || || ||||| | |||| | || Sbjct 1647 ATGACAGGAGCACGCTTCATTATCTAA-TCTCCCAGCGTGGTTTAATCAGACGATCAAAA 1589 Query 22356 ATTTCTGCACAAACCGGCTCCCAGATAGCCACAGCATTGCGCCAGGCATTTGGAGTACTA 22415 || || ||||| || |||||||||| | || || |||||||| | | | | Sbjct 1588 ATCTCATTGCAAACAGGTTCCCAGATAGAGAGGGCGTTACGCCAGGCGCCGGTTGAAGAA 1529 Query 22416 CGTTGGTTAGCGGCTTGTTCGAACACAGTTCGCATACGAACTTGTCCTTTACCTACTTCG 22475 ||||| | | || ||||| || || |||| |||||| | || |||||||| ||||| Sbjct 1528 CGTTGATCAATAGCCTGTTCAAAAACGGTTCTCATACGGATCTGACCTTTACCGACTTCA 1469 Query 22476 TCAGTTACTCGAACAACTTCTTTAAGGACCATGCTGCCCCAAGCATCACGTATATGGTCA 22535 || ||| | || ||||| | ||| || ||||| || ||||| ||||| || || || || Sbjct 1468 TCGGTTTCACGTACAACATTTTTCAGAACCATACTTCCCCAGGCATCCCGAATTTGTTCT 1409 Query 22536 TCCATCCACTGAGATTGGCTACCAACAGCATTACTGAATTTAGTAATCAATACCCTAACA 22595 ||||||||| | || || || | ||||||| ||||||||| || | | ||| Sbjct 1408 TCCATCCACGGGGACTGCGAGCCGTTATTATTACTGTATTTAGTAAGCAGAATACGGACA 1349 Query 22596 TCAGGCTCAAACCCGCCGAGGTCCA----CTCCAGCCATAAGATCACGCAACATAGTGAA 22651 || ||||| || || || |||| || ||| || || || | |||| ||| Sbjct 1348 TCTGGCTCGAAGCCTTTAAGATCCACGTTCTTAAGC----AGGTCGCGAAGCATATCGAA 1293 Query 22652 AAATTGCAATGTGCTGACATAGTCATAAAGTTCAGCTGGAGTTGGTACAACAATGACATC 22711 ||| |||| || | | ||||| | || || || ||||| || |||| | ||||| Sbjct 1292 AAACTGCAGTGCGGAGGTGTAGTCGAACAGCTCTGCCGGAGTAGGGACAATCAGTACATC 1233 Query 22712 AGCGGCACAAACCACATTTATTGTGCCTATGCCCAAGTTAGGTGCACTGTCTAAAACAAC 22771 ||| ||||| || |||||||| || || || || | ||| ||||| ||||| | ||| | Sbjct 1232 AGCAGCACATACAACATTTATCGTACCGATACCAAGGTTGGGTGCGCTGTCGATAACTAT 1173 Query 22772 TACGTCATAGCTGTCCCATACGGACTCGATTGCAGCACGTAGCATCATGTGCGGTGCTAC 22831 |||||||| | || | || || || ||| ||||||| |||||| | | Sbjct 1172 CACGTCATAATCATGAGCGACAGTTTCAATGGCCAGACGGAGCATCAGGTGCGGGTCAGC 1113 Query 22832 AGGGAGCTT---TTCGGCATCATGCAAAGGATATAATTCAGACTCAATTCGATGGATGGC 22888 ||| | || |||| || | | || | || | ||||| || || | || Sbjct 1112 AGGTAATTTGCCTTCGTCAAATTTC--CCCAT-CAGCTCGGTTTCAATGCGGTGCAGTGC 1056 Query 22889 CAGACAGGATGGGATTATGTCCAGATTTGGCCAACATGTTGGTTTGATGGCGTACATAGC 22948 ||||||||| ||||| || || || ||||| || || || || || ||||| | || Sbjct 1055 CAGACAGGACGGGATGATATCAAGGCCAGGCCAGCAGGTGGGCTTTATAGCGTAGCTGGC 996 Query 22949 ATCATCACGTTCACCTAAGTAATAAGGGAGTAGAGTTTCGTCTTCGTGGATATGCAAATC 23008 ||||| ||| || | ||| | || || ||||| || || | || ||||| | ||| Sbjct 995 GTCATCCTTTTCCCCAAGATAAAAGGGCAGGAGAGTGTCCTCAGCATGAATATGAAGATC 936 Query 23009 AGGTACATACCCATGATAAAGGCTGGCGGTAGCTTGCGGATCTGTAGCATCAATCAATAG 23068 || || | || ||||| | || || | || || || | | |||| | || Sbjct 935 GGGCACCCATCCGTGATACATAGAAGCAGTTCCCTGTGGGTCATTGCCTTCAACAAGCAG 876 Query 23069 TACGCGTAAGCCCTGCAATGCTAACCATTGAGCTGTATGCACTGAGGTACT--TGTTTTG 23126 || || | || | || || | ||||| || || || |||| |||||| Sbjct 875 AACACGGAGTCCTTTCAGAGCAAGATCCTGAGCCAGGTGAACGGA--TACTGAGGTTTTG 818 Query 23127 TATGCGCCACCTTTATGTGCCGCTATAGCCAATACTACTG-GGTCTTGC-CCATCAGGTC 23184 || | |||||||| || || || | | ||||| | | | || || | |||| | Sbjct 817 TAAACACCACCTTTGTGAGCAGCAACA-CCAAT-CACCGGCGGAAACGCATCTTCAGCAC 760 Query 23185 GTTTCCAGCGTGTACCAAAATGATCCCGAAGGTCGTTAATTTGTTGAATCGTATATCCCG 23244 | | ||||||||||| |||||| | || || ||||| | || ||||| || Sbjct 759 GGCGCAGTCGTGTACCAAATACATCCCGCATGTGATTGATTTGCTCGATGGTATAACCAA 700 Query 23245 CTCTTTGTGGCACTCTGCCACGTGTAACCATATCCGCAGGTGGCAATTTTCCTGAGTCCT 23304 | | ||| ||||| ||||| || ||||||| | | |||| || | | || Sbjct 699 CGCGTTGCTCAACTCTTCCACGGGTTTCCATATCAGGGTGAGGCAGCCGGCCAGCTTTCT 640 Query 23305 CGCCATTGCGGATGGTCTGAGGGGTTACACCAACTAATTCTGCAGCTTCAGTAATACCCC 23364 || ||| | ||| | ||||| | || |||||||| || || |||||| ||| | || Sbjct 639 CGGCATCCCTGATAGCCTGAGATGACACGCCAACTAAATCAGCTGCTTCACCAATCCTCC 580 Query 23365 ATCGACGAGTGATTGCTCGAGCCTCTGGACTATCGTCACCAAATTGAGCGCGAGCTATGG 23424 | || || || ||| || || || ||||| || ||| ||| || || || || | Sbjct 579 AGCGCCGGGTTATTTTCCGGGCTTCCGGACTGTCATCATTAAACTGCGCAATGGCGATTG 520 Query 23425 CTTGGGTCAT 23434 ||| ||||| Sbjct 519 CTTTCGTCAT 510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148153070915434