Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq567 113 4e-20 >seq567 Length=338301 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 || || || ||||| |||||||||||||| || || || ||||||| | || | | Sbjct 136090 CTTAAAACTAAATGAAGTGTAGATTCTTTCTGGATATTATAATCGCTAAGCGTACGACCA 136149 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 || |||||||| || || ||| |||| || |||||||||||| || | ||||| ||| Sbjct 136150 TCCTCCAATTGCTTCCCTGCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCCTTCCTTG 136209 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || || || ||||| ||||||| ||| || ||| |||| || || Sbjct 136210 TCTTGGATCTTAGACTTCACAGTCTCAACAGAGTCGTTTGGCTCCACATCCAGAGTGATC 136269 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||||| | |||||||||||||||||||| Sbjct 136270 GTTTTTCCGGTGAGTGTTTTGACAAAAATTTGCAT 136304 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 19991 AACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTA 20050 ||||| | ||||| || || || ||||| || || || |||||||||| | ||| | Sbjct 137476 AACCTAAGAACCAAGTGGAGAGTGGATTCCTTCTGGATATTGTAATCGCTTAAAGTGCGA 137535 Query 20051 GAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCT 20110 ||| || | ||||| || || |||| || ||||||||||| ||| | ||||| Sbjct 137536 CCATCCTCAAGCTGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCC 137595 Query 20111 TTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTA 20170 ||||| ||| || ||| ||| ||||||| ||| || ||| |||| ||| Sbjct 137596 TTGTCTTGAATCTTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTA 137655 Query 20171 ATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || || || ||||| || ||||| || ||||| |||||| Sbjct 137656 ATTGTCTTACCGGTTAAGGTTTTCACGAAAATCTGCATT 137694 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || || ||||||||||| || ||||| ||||||| | || | ||| ||| Sbjct 137257 ACCAAGTGGAGAGTAGATTCTTTCTGGATGTTATAATCGCTAAGTGTGCGACCATCCTCC 137316 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 |||||||| || ||| |||| || ||||||||||| || | ||||| ||||| Sbjct 137317 AATTGTTTCCCGGCAAAAATCAGTCTCTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGG 137376 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| || || | |||||||| || || || | ||| || |||||| Sbjct 137377 ATTTTAGACTTTACAGTCTCGACAGAATCATTGGGCTCAACATCAAGGGTGATCGTTTTG 137436 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || | ||||| ||||| |||||||| Sbjct 137437 CCAGTAAGTGTTTTAACAAAGATTTGCAT 137465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419557760319717