Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3622 91.5 4e-13 >seq3622 Length=296610 Score = 91.5 bits (100), Expect = 4e-13 Identities = 108/145 (74%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 22499 TTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGC 22558 |||| |||||| || | ||||| |||||||||||||| ||||| ||| || |||||| Sbjct 278185 TTGCCTTTGCTCTG-TCGAAGGAATTTTCTTTTCTGGTTCATTTGCTGCCATTTTTTGGT 278243 Query 22559 TaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATG 22618 ||||||| |||| | ||||| || | | || ||||| | || ||| | |||| Sbjct 278244 TAAAAAAGCGTGGTTTAATGCCTGGCTTGGCCTTCAGTAATGAACTCATCAGCAGGGATG 278303 Query 22619 AGGGTCTTCATACCGATTTTGCGTG 22643 |||| |||||||| ||||| || || Sbjct 278304 AGGGACTTCATACTGATTTCGCATG 278328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303257462601974