Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq567 141 8e-29 >seq567 Length=338301 Score = 141 bits (156), Expect = 8e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||| | || |||||| |||| || | || || ||| | ||| Sbjct 136304 ATGCAAATTTTTGTCAAAACACTCACCGGAAAAACGATCACTCTGGATGTGGAGCCAAAC 136245 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||| | | ||| || || ||||| ||||| ||||| || |||||||||||| Sbjct 136244 GACTCTGTTGAGACTGTGAAGTCTAAGATCCAAGACAAGGAAGGAATTCCTCCCGATCAA 136185 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||||| | || |||||| | || |||| | | | ||||||||||| Sbjct 136184 CAGAGACTGATTTTTGCAGGGAAGCAATTGGAGGATGGTCGTACGCTTAGCGATTATAAT 136125 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206 || || |||||||||||| |||||||||| |||||| Sbjct 136124 ATCCAGAAAGAATCTACACTTCATTTAGTTTTAAGA 136089 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || |||||| | ||||| ||| | || || |||| || ||| |||| Sbjct 137921 ATGCAAATTTTCGTCAAAACACTCACTGGTAAAACAATCACTCTCGATGTTGAGCCCAAT 137862 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||| | | ||| ||||| ||||| ||||| ||||| || || || ||||| Sbjct 137861 GACTCTGTTGAGACTGTCAAGTCTAAGATCCAGGACAAGGAAGGAATTCCCCCGGATCAG 137802 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||||| | ||| |||||||| ||||||| | | | | || || |||||| Sbjct 137801 CAGAGACTGATTTTTGCCGGAAAGCAACTTGAAGATGGCCGCACTCTGAGTGACTATAAC 137742 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || ||||||||||| | || || || | || |||||||| ||| Sbjct 137741 ATCCAGAAAGAATCTACCCTCCACTTGGTTCTTAGGTTGAGAGGTGGA 137694 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||| | ||||| ||| |||| ||| | || || ||| |||| Sbjct 137465 ATGCAAATCTTTGTTAAAACACTTACTGGCAAAACGATCACCCTTGATGTTGAGCCCAAT 137406 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||||| || || || || ||||| ||||| || ||||| |||||| Sbjct 137405 GATTCTGTCGAGACTGTAAAGTCTAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAA 137346 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||||| | ||| || ||| | || |||| | | | |||||||||||| Sbjct 137345 CAGAGACTGATTTTTGCCGGGAAACAATTGGAGGATGGTCGCACACTTAGCGATTATAAC 137286 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || ||||||||||| | || || || | |||||||||| || Sbjct 137285 ATCCAGAAAGAATCTACTCTCCACTTGGTTCTTCGATTGAGAGGTGG 137239 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || |||||| | ||||| ||| | || || |||| || ||| |||| Sbjct 137237 ATGCAAATTTTCGTCAAAACACTCACTGGTAAAACAATCACTCTCGATGTTGAGCCCAAT 137178 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||| | | ||| || || ||||| ||||| ||||| || || || ||||| Sbjct 137177 GACTCTGTTGAGACTGTTAAGTCTAAGATCCAGGACAAGGAAGGAATTCCCCCGGATCAG 137118 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||||| | ||| |||||||| ||||||| | | | | || || |||||| Sbjct 137117 CAGAGACTGATTTTTGCCGGAAAGCAACTTGAAGATGGCCGCACTCTGAGTGACTATAAC 137058 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || ||||||||||| | || || || | || |||||||| ||| Sbjct 137057 ATCCAGAAAGAATCTACCCTCCACTTGGTTCTTAGGTTGAGAGGTGGA 137010 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||| ||| | || || |||| || ||| | || Sbjct 138149 ATGCAGATATTTGTGAAGACGTTGACTGGCAAAACTATAACTCTCGATGTAGAGCCTGAC 138090 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||||| |||||| |||||| ||||| ||||| || || || || ||| Sbjct 138089 GATTCGGTCGAGACCGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCGCCAGACCAA 138030 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||||| |||| || || |||||||| || |||| | | | | ||| ||||| Sbjct 138029 CAGAGACTCATTTTCGCAGGAAAGCAACTTGAGGATGGTCGCACTCTTAACGACTATAAT 137970 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || ||||||||||| | || || || | |||||||||| || Sbjct 137969 ATCCAGAAAGAATCTACTCTCCACTTGGTTCTTCGATTGAGAGGTGG 137923 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || ||||| ||||| || || | ||||| | || || ||| |||| Sbjct 136533 AATGCAGATTTTCGTGAAAACCTTAACCGGTAAGACAATTACTCTGGATGTGGAGCCCAA 136474 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||| | | ||| || || |||||| || || ||||| || || || ||||| Sbjct 136473 CGACTCTGTTGAGACTGTGAAGTCTAAGATTCAAGATAAGGAAGGAATTCCCCCTGATCA 136414 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||||||||||| | ||| ||||| || ||||| | | | | | || || ||||| Sbjct 136413 ACAGAGACTGATTTTTGCCGGTAAGCAGCTTGAAGACGGCCGCACTCTGAGTGACTATAA 136354 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || |||||||| | || ||||| | || ||||| || || Sbjct 136353 TATCCAGAAGGAATCTACTCTCCACTTAGTTCTTAGGTTGAGGGGTGG 136306 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || ||||| ||||| || || | ||||| | || || ||| |||| Sbjct 137694 AATGCAGATTTTCGTGAAAACCTTAACCGGTAAGACAATTACTCTGGATGTGGAGCCCAA 137635 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||| | | ||| || ||| |||||| ||||| ||||| || || || ||||| Sbjct 137634 CGACTCTGTTGAGACGGTAAAATCTAAGATTCAAGACAAGGAAGGAATTCCCCCAGATCA 137575 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||||||||||| || || || || || || |||| | | | |||||||| || Sbjct 137574 ACAGAGACTGATTTTCGCAGGAAAACAGCTTGAGGATGGTCGCACTTTAAGCGATTACAA 137515 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || ||||| || | || || || | || ||||| || || Sbjct 137514 TATCCAGAAGGAATCCACTCTCCACTTGGTTCTTAGGTTGAGGGGTGG 137467 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/118 (76%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 24102 CCCGATCAAC-AGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAG 24160 |||||||||| |||||||||||| | ||| |||||| | || |||| | | | || Sbjct 136650 CCCGATCAACTAGAGACTGATTTTTGCCGGGAAGCAATTGGAGGATGGTCGCACGCTTAG 136591 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||||||||| || ||||||||||| | ||||| || | || |||||||| ||| Sbjct 136590 TGATTATAACATCCAGAAAGAATCTACTCTGCATTTGGTTCTTAGGTTGAGAGGTGGA 136533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429905834212335