Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq567 96.9 3e-15 >seq567 Length=338301 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| |||||||| ||||| || ||||| || || |||| ||| ||| Sbjct 137237 ATGCAAATTTTCGTCAAAACACTCACTGGTAAAACAATCACTCTCGATGTTGAGCCCAAT 137178 Query 115346 GACACTGTTG-GACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||| |||||| ||| || || || || || || ||||| | ||| ||||| Sbjct 137177 GACTCTGTTGAGAC-TGTTAAGTCTAAGATCCAGGACAAGGAAGGAATTCCCCCGGATCA 137119 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| ||||| |||| ||| || || ||| | ||||||| | || || || ||||| Sbjct 137118 GCAGAGACTGATTTTTGCCGGAAAGCAACTTGAAGATGGCCGCACTCTGAGTGACTATAA 137059 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||| || ||||| ||||| | || |||| | || ||| |||| |||| Sbjct 137058 CATCCAGAAAGAATCTACCCTCCACTTGGTTCTTAGGTTGAGAGGTGGAA 137009 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| |||||||| ||||| || ||||| || || |||| ||| ||| Sbjct 137921 ATGCAAATTTTCGTCAAAACACTCACTGGTAAAACAATCACTCTCGATGTTGAGCCCAAT 137862 Query 115346 GACACTGTTG-GACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||| |||||| ||| || || || || || || ||||| | ||| ||||| Sbjct 137861 GACTCTGTTGAGAC-TGTCAAGTCTAAGATCCAGGACAAGGAAGGAATTCCCCCGGATCA 137803 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| ||||| |||| ||| || || ||| | ||||||| | || || || ||||| Sbjct 137802 GCAGAGACTGATTTTTGCCGGAAAGCAACTTGAAGATGGCCGCACTCTGAGTGACTATAA 137743 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||| || ||||| ||||| | || |||| | || ||| |||| |||| Sbjct 137742 CATCCAGAAAGAATCTACCCTCCACTTGGTTCTTAGGTTGAGAGGTGGAA 137693 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||||||||| ||||| |||||||| || || | || |||| | | | Sbjct 136304 ATGCAAATTTTTGTCAAAACACTCACCGGAAAAACGATCACTCTGGATGTGGAGCCAAAC 136245 Query 115346 GACACTGTTG-GACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||| |||||| ||| || || || || || || ||||| | || ||||| Sbjct 136244 GACTCTGTTGAGAC-TGTGAAGTCTAAGATCCAAGACAAGGAAGGAATTCCTCCCGATCA 136186 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||||| |||| ||| || || ||||| || |||| || | ||||||||| Sbjct 136185 ACAGAGACTGATTTTTGCAGGGAAGCAATTGGAGGATGGTCGTACGCTTAGCGATTATAA 136126 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || ||||| ||||| | ||| | || || ||| | || || || Sbjct 136125 TATCCAGAAAGAATCTACACTTCATTTAGTTTTAAGACTTCGTGGTGG 136078 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| ||||| || || || ||||| || ||| | || ||| ||| Sbjct 137465 ATGCAAATCTTTGTTAAAACACTTACTGGCAAAACGATCACCCTTGATGTTGAGCCCAAT 137406 Query 115346 GACACTGTTG-GACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || |||| | ||| ||||| ||||| || || ||||| | || |||||| Sbjct 137405 GATTCTGTCGAGACT-GTAAAGTCTAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCA 137347 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||||| |||| ||| || |||||||| || |||| || | ||||||||| Sbjct 137346 ACAGAGACTGATTTTTGCCGGGAAACAATTGGAGGATGGTCGCACACTTAGCGATTATAA 137287 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| || ||||| |||||| | || |||| | ||||| |||| || Sbjct 137286 CATCCAGAAAGAATCTACTCTCCACTTGGTTCTTCGATTGAGAGGTGG 137239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425314156402840