Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq567 104 2e-17 >seq567 Length=338301 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || || || | || || ||||| || || ||||||||||| Sbjct 137467 CCACCCCTCAACCTAAGAACCAAGTGGAGAGTGGATTCCTTCTGGATATTGTAATCGCTT 137526 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| || |||||| | || | | ||| || || || || Sbjct 137527 AAAGTGCGACCATCCTCAAGCTGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGA 137586 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| || || || | | ||| |||| ||| ||| ||| | Sbjct 137587 ATTCCTTCCTTGTCTTGAATCTTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACA 137646 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || |||||||||| ||||| |||||||||||||| Sbjct 137647 TCCAGAGTAATTGTCTTACCGGTTAAGGTTTTCACGAAAATCTGCAT 137693 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || ||||| || | || || ||||| || || || || || ||| Sbjct 136306 CCACCCCTCAACCTAAGAACTAAGTGGAGAGTAGATTCCTTCTGGATATTATAGTCACTC 136365 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || |||||||| || || | || | | ||| || || || || Sbjct 136366 AGAGTGCGGCCGTCTTCAAGCTGCTTACCGGCAAAAATCAGTCTCTGTTGATCAGGGGGA 136425 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || || || ||| | ||| |||| ||| ||| ||| | Sbjct 136426 ATTCCTTCCTTATCTTGAATCTTAGACTTCACAGTCTCAACAGAGTCGTTGGGCTCCACA 136485 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || |||||||||| ||||| |||||||||||||| Sbjct 136486 TCCAGAGTAATTGTCTTACCGGTTAAGGTTTTCACGAAAATCTGCAT 136532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471978832778880