Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq567 122 8e-23 >seq567 Length=338301 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || | || || ||| | ||||| | || || ||| | | Sbjct 137465 ATGCAAATCTTTGTTAAAACACTTACTGGCAAAACGATCACCCTTGATGTTGAGCCCAAT 137406 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | | ||| |||||| ||||| ||||| ||||| ||||| ||| Sbjct 137405 GATTCTGTCGAGACTGTAAAGTCTAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAA 137346 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | ||||||||||| |||||||| || |||| |||||| | ||||||| || Sbjct 137345 CAGAGACTGATTTTTGCCGGGAAACAATTGGAGGATGGTCGCACACTTAGCGATTATAAC 137286 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || |||||||| || || || || || || Sbjct 137285 ATCCAGAAAGAATCTACTCTCCACTTGGTTCT 137254 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | || |||||| | ||||| |||| || ||| | | Sbjct 137237 ATGCAAATTTTCGTCAAAACACTCACTGGTAAAACAATCACTCTCGATGTTGAGCCCAAT 137178 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||| || | ||| | | ||| || ||| ||||| ||||| ||||| || || || Sbjct 137177 GACTCTGTTGAGACTGTTAAGTCTAAGATCCAGGACAAGGAAGGAATTCCCCCGGATCAG 137118 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | ||||||||||| || ||| | ||||||| |||||| || | || || || Sbjct 137117 CAGAGACTGATTTTTGCCGGAAAGCAACTTGAAGATGGCCGCACTCTGAGTGACTATAAC 137058 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || |||||||| || || || || || || ||| | ||||| |||| Sbjct 137057 ATCCAGAAAGAATCTACCCTCCACTTGGTTCTTAGGTTGAGAGGTGGAA 137009 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | || |||||| | ||||| |||| || ||| | | Sbjct 137921 ATGCAAATTTTCGTCAAAACACTCACTGGTAAAACAATCACTCTCGATGTTGAGCCCAAT 137862 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||| || | ||| | | ||| || ||| ||||| ||||| ||||| || || || Sbjct 137861 GACTCTGTTGAGACTGTCAAGTCTAAGATCCAGGACAAGGAAGGAATTCCCCCGGATCAG 137802 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | ||||||||||| || ||| | ||||||| |||||| || | || || || Sbjct 137801 CAGAGACTGATTTTTGCCGGAAAGCAACTTGAAGATGGCCGCACTCTGAGTGACTATAAC 137742 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || |||||||| || || || || || || ||| | ||||| |||| Sbjct 137741 ATCCAGAAAGAATCTACCCTCCACTTGGTTCTTAGGTTGAGAGGTGGAA 137693 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || || |||||||| | || || | || |||||| | Sbjct 136533 AATGCAGATTTTCGTGAAAACCTTAACCGGTAAGACAATTACTCTGGATGTGGAGCCCAA 136474 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || | ||| | ||||| | || | ||| || || ||||| ||||| ||||| | Sbjct 136473 CGACTCTGTTGAGACTGTGAAGTCTAAGATTCAA-GATAAGGAAGGAATTCCCCCTGATC 136415 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| | | ||||||||||| || || | ||||| | |||||| || | || || | Sbjct 136414 AACAGAGACTGATTTTTGCCGGTAAGCAGCTTGAAGACGGCCGCACTCTGAGTGACTATA 136355 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||| || || ||||| || || || ||||| || ||| | || || || Sbjct 136354 ATATCCAGAAGGAATCTACTCTCCACTTAGTTCTTAGGTTGAGGGGTGG 136306 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || || |||||||| | || || | || |||||| | Sbjct 137694 AATGCAGATTTTCGTGAAAACCTTAACCGGTAAGACAATTACTCTGGATGTGGAGCCCAA 137635 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || | ||| | | || | || | ||| ||||| ||||| ||||| || || | Sbjct 137634 CGACTCTGTTGAGACGGTAAAATCTAAGATTCAA-GACAAGGAAGGAATTCCCCCAGATC 137576 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| | | ||||| || || ||||| | || |||| ||||||| | ||||||||| Sbjct 137575 AACAGAGACTGATTTTCGCAGGAAAACAGCTTGAGGATGGTCGCACTTTAAGCGATTACA 137516 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||| || || |||||||| || || || || || ||| | || || || Sbjct 137515 ATATCCAGAAGGAATCCACTCTCCACTTGGTTCTTAGGTTGAGGGGTGG 137467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433297596217955