Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq149 102 2e-16 seq3124 93.3 9e-14 seq2990 91.5 3e-13 >seq149 Length=77282 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||| Sbjct 1982 TAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 1923 Query 142562 GCCCCACATCGGGC 142575 | ||||| |||||| Sbjct 1922 GACCCACGTCGGGC 1909 >seq3124 Length=340115 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| | ||||||||||||| | ||||| |||||||| Sbjct 247765 TAGCCCGGCTAGCTCAGTCGGTAGAGCACAAGACTCTTAATCTTGGGGTCGCGGGTTCGA 247824 Query 142562 GCCCCACATCGGGC 142575 | ||| | |||||| Sbjct 247825 GACCCGCGTCGGGC 247838 >seq2990 Length=597859 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||| ||||||||| Sbjct 500561 AGCCCGGCTAGCTCAGTCGGTAGAGCACAAGACTCTTAATCTTGGGGTCGCGGGTTCGAG 500620 Query 142563 CCCCACATCGGGC 142575 ||| | |||||| Sbjct 500621 ACCCGCGTCGGGC 500633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027760985151637