Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq567 134 1e-26 >seq567 Length=338301 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| ||||| ||||||||||| | ||||||||||| || || || |||||||| Sbjct 136078 CCACCACGAAGTCTTAAAACTAAATGAAGTGTAGATTCTTTCTGGATATTATAATCGCTA 136137 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| ||| || | ||| || || || | || || | |||||| || |||||| Sbjct 136138 AGCGTACGACCATCCTCCAATTGCTTCCCTGCAAAAATCAGTCTCTGTTGATCGGGAGGA 136197 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTCGAC 114334 || ||||| ||||| ||| || | || | || ||||| | |||| | | || || Sbjct 136198 ATTCCTTCCTTGTCTTGGATC-TTAGACTTCACAGTCTCAACAGAGTCGTTTGGCTCCAC 136256 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | |||||| ||||| || ||||| |||||||| ||||| Sbjct 136257 ATCCAGAGTGATCGTTTTTCCGGTGAGTGTTTTGACAAAAATTTGCAT 136304 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | || ||||| || || || ||||||||||| | ||| ||| ||| || Sbjct 137484 AACCAAGTGGAGAGTGGATTCCTTCTGGATATTGTAATCGCTTAAAGTGCGACCATCCTC 137543 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 ||| ||||| || ||| | || || | |||||| || || ||||| ||||| ||||| Sbjct 137544 AAGCTGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCCTTGTCTTG 137603 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 |||||| ||||| | ||||| | |||| ||| || || |||| || | || || Sbjct 137604 AATCTTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTT 137663 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| | ||||| || ||||||||||| Sbjct 137664 ACCGGTTAAGGTTTTCACGAAAATCTGCAT 137693 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | ||||||||||| || ||||| || || |||| ||| || |||||| Sbjct 137028 AACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCATCTTC 137087 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||| || || || | || || | ||| || ||||| ||||| ||||| ||||| Sbjct 137088 AAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTGTCCTG 137147 Query 114293 AATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTT 114351 ||| || | ||| | || ||||| | ||| ||| || || || | || | |||| Sbjct 137148 GATC-TTAGACTTAACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATTGTTT 137206 Query 114352 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || ||||| || ||||| ||||| Sbjct 137207 TACCAGTGAGTGTTTTGACGAAAATTTGCAT 137237 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | ||||||||||| || ||||| |||||||| | || ||| ||| || Sbjct 137256 AACCAAGTGGAGAGTAGATTCTTTCTGGATGTTATAATCGCTAAGTGTGCGACCATCCTC 137315 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 | |||||| || || | || || | |||||| || |||||||| ||||| ||||| Sbjct 137316 CAATTGTTTCCCGGCAAAAATCAGTCTCTGTTGATCAGGAGGAATTCCTTCCTTGTCTTG 137375 Query 114293 AATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTT 114351 || ||| | || | || || || | || ||| || || || | ||| | ||||| Sbjct 137376 GAT-TTTAGACTTTACAGTCTCGACAGAATCATTGGGCTCAACATCAAGGGTGATCGTTT 137434 Query 114352 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || || ||||| ||||| || ||||| Sbjct 137435 TGCCAGTAAGTGTTTTAACAAAGATTTGCAT 137465 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | ||||||||||| || || || || ||| | | ||| ||| ||| || Sbjct 137940 AACCAAGTGGAGAGTAGATTCTTTCTGGATATTATAGTCGTTAAGAGTGCGACCATCCTC 137999 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||| || || ||| | ||||| | ||||||||| || ||||| ||||| ||||| Sbjct 138000 AAGTTGCTTTCCTGCGAAAATGAGTCTCTGTTGGTCTGGCGGAATACCTTCCTTGTCTTG 138059 Query 114293 AATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTT 114351 |||| || | ||| | || || || | ||| | || || || | || | |||| Sbjct 138060 AATC-TTAGATTTGACGGTCTCGACCGAATCGTCAGGCTCTACATCGAGAGTTATAGTTT 138118 Query 114352 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| |||| || || ||||| |||||||| Sbjct 138119 TGCCAGTCAACGTCTTCACAAATATCTGCAT 138149 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 |||||| || | |||||||| || || || || || || |||| ||| || ||||| Sbjct 136323 AACTAAGTGGAGAGTAGATTCCTTCTGGATATTATAGTCACTCAGAGTGCGGCCGTCTTC 136382 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 ||| || ||||| || | || || | |||||| || || ||||| ||||| || || Sbjct 136383 AAGCTGCTTACCGGCAAAAATCAGTCTCTGTTGATCAGGGGGAATTCCTTCCTTATCTTG 136442 Query 114293 AATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTT 114351 |||||| || | | || ||||| | |||| ||| || || |||| || | || | Sbjct 136443 AATCTTAGACTTCA-CAGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCT 136501 Query 114352 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| | ||||| || ||||||||||| Sbjct 136502 TACCGGTTAAGGTTTTCACGAAAATCTGCAT 136532 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | ||||||||||| || ||||| || || |||| ||| || |||||| Sbjct 137712 AACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCATCTTC 137771 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||| || || || | || || | ||| || ||||| ||||| ||||| ||||| Sbjct 137772 AAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTGTCCTG 137831 Query 114293 AATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTT 114351 ||| || | || | || ||||| | ||| ||| || || || | || | |||| Sbjct 137832 GATC-TTAGACTTGACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATTGTTT 137890 Query 114352 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || ||||| || ||||| ||||| Sbjct 137891 TACCAGTGAGTGTTTTGACGAAAATTTGCAT 137921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420104921926284