Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_009542.2 Length=33985 Score E Sequences producing significant alignments: (Bits) Value seq38 623 2e-174 >seq38 Length=12333 Score = 623 bits (690), Expect = 2e-174 Identities = 530/651 (81%), Gaps = 9/651 (1%) Strand=Plus/Minus Query 10932 TAGTCCTTTCAGTATCAACTGCCGCCCCTCTGGCGTCAGTGATCCAAGTAGCCCCAGCAC 10991 || ||||| || | ||||||| |||||||||||||||||| || | | | ||||| Sbjct 643 TAATCCTTGCAACACTAACTGCCTCCCCTCTGGCGTCAGTGAGCCCATCAAGCTGAGCAC 584 Query 10992 CAACTGGTTCGTCGTCCTGGCCGACGGACTCAGCGTATGAGTGAACGACAGTGTGGCTAC 11051 || ||| || || ||| ||||||| || || || || || | ||||||||| ||||| || Sbjct 583 CAGCTGATTGGTGGTCTTGGCCGAGGGGCTGAGGGTGTGGGCGAACGACAGGGTGGCCAC 524 Query 11052 CCAGCTATGACCACACTCCGCATCAGTGCACTGGCAATAGAGATCGGAGACCTCATCGCT 11111 |||||| || |||||||| ||||| ||||||||||| |||||||| ||||| |||||||| Sbjct 523 CCAGCTGTGTCCACACTCGGCATCGGTGCACTGGCAGTAGAGATCCGAGACATCATCGCT 464 Query 11112 CAGCCGATTGGTCTTGGTAATACGGCCTCGCTGGCCACACTCTTTGCAAAAAACCCGCAT 11171 ||| || |||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct 463 CAGTCGGTTGGTCTTGGTAATGCGGCCCCGCTGGCCACACTCTTTGCAATAAACCCGCAT 404 Query 11172 CACCCCTCCCGATAAATCGAAATCTCAATCACCAGGTTGCATCTTACATCAATGGG-ACT 11230 ||| || || | ||| ||||| | ||| | ||||| | | || | ||| Sbjct 403 CACGCCCCCTTTTCTATCCAAATC------AACAGCCT--ATCTTGCCATAGTGAGCACT 352 Query 11231 GTGTTTTTATACAGCGGCACCTATCGTTTCTCGAAACGTGACCCACAGCGCCCGGGGCAG 11290 || | ||||||||| || |||| | || ||||| |||||| || | || || || Sbjct 351 GTTTGTTTATACAGTGGAGCCTACATTCTCCCGAAAATCGACCCAGAGGGAGCGAGGGAG 292 Query 11291 GCCAGCGCTGTTGATGGCGTCCTGCACCAGTTCACACAGCGGCAGCACTTCGTTCCTGGC 11350 || |||||||||||||| ||||| | || || ||||||||||| |||||||| | ||| Sbjct 291 TCCCGCGCTGTTGATGGCATCCTGGATAAGCTCGCACAGCGGCAGTACTTCGTTGCGGGC 232 Query 11351 ATAGGTGGCGTCGTACTTCTCGGGATCCCCGAGCCCGCCCCCGCCATTGGTGGGGATAAT 11410 ||||||||| |||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct 231 ATAGGTGGCATCGTACTTCTCGGGATCCCCGAGCCCTCCCCCGCCATTGGTCGGAATAAT 172 Query 11411 GCCGGCCAGCGCTGGCGGGTACCGATGCGCCGTCAGCACATCCTGGGCAGTGATCCCCTT 11470 |||||||||||| | |||| | ||||| | ||||||||||||||||| ||||||||||| Sbjct 171 GCCGGCCAGCGCCGCCGGGAAGCGATGGGATGTCAGCACATCCTGGGCTGTGATCCCCTT 112 Query 11471 GATAGCCGCGAACTCGTCCTTGGTTGCGATGTCCCCCACCGGGATGAGCTTGATGCCATC 11530 ||| ||||||||||| |||||||| ||||| |||||||| ||||| |||||||||||||| Sbjct 111 GATGGCCGCGAACTCATCCTTGGTCGCGATATCCCCCACTGGGATCAGCTTGATGCCATC 52 Query 11531 GGGCTTGCCATCGGGGATGTTCACGAACATCGAGCGGAAGTTCCCTAcccc 11581 |||||||| || |||||||| |||||||| |||||||||||||| ||||| Sbjct 51 AGGCTTGCCGTCCGGGATGTTGACGAACATGGAGCGGAAGTTCCCCACCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108622973550598