Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4076 134 1e-26 >seq4076 Length=468004 Score = 134 bits (148), Expect = 1e-26 Identities = 324/485 (67%), Gaps = 4/485 (1%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCC-CGGTGCCACAGATGTCTTCGTGTTTCCT 93950 || |||||||| ||||||| || || | | ||| | ||| || || || ||| | Sbjct 420959 GCTACCCCGACATTGTTCAATGCTGGTTCGAACTGTGGC-CAGTTGGCTAGTTGCTTCTT 421017 Query 93951 GATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 ||| | | || | ||| |||| || |||||||||| | | || || ||| | Sbjct 421018 GATTGCCATGAAAGATGACAGCATCAAGGGTATTTTCGACACATTGAGCGAATGCGCGGC 421077 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||| || || || || || ||||||||| | ||| ||| || | || ||| ||||| Sbjct 421078 CATTTCTAAGTATGCTGGTGGAATCGGGTTACATGTGCACAACATTCGAGCCTCTGGTTC 421137 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 | || || || ||||| || ||||| ||||| || ||||| |||| ||||| Sbjct 421138 ATTTATAGCTGGAACGTGCGGCACTTCTAACGGTCTCGTACCAATGCTTAGGGTATTCAA 421197 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||||| | || ||||| || || |||||| | |||| || ||||| || | || Sbjct 421198 CAACGCATCCCGTTACGTCGATCAAGGTGGTAACAAGAGGCCAGGATCTTTTGCTATTTA 421257 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA- 94249 ||| || ||||||||||| || | | ||| | || || | ||||| |||| | Sbjct 421258 TCTTGAACCCTGGCACGCTGATATTTTCGAATTCCTTGAACTCAGGAAGAA-TACGGGAG 421316 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 ||| | |||||||| || | || |||||| ||| |||| || | || |||| Sbjct 421317 CCGAGGAAGTTAGGGCCAGGGATTTATTTCTCGCTCTTTGGATGCCGGATTTGTTCATGA 421376 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 || | || ||| || || | |||| |||| | ||||| ||| ||||||||| || | Sbjct 421377 AAAGAGTTGAGGAAGACGGGGACTGGTGTCTGATGTGTCCTCATGCATGTCCCGGCCTAT 421436 Query 94370 CCGAC 94374 | ||| Sbjct 421437 CAGAC 421441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494687598481720