Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq567 122 2e-22 >seq567 Length=338301 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 || || || | |||||| || || || || |||| ||| |||||| || ||| | ||| Sbjct 137023 CTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCA 137082 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 ||||| || ||||||||||| || || || | |||||| ||||| ||||||||| Sbjct 137083 TCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTG 137142 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 ||||| ||||| ||| || | || || | ||| | | || ||||| | ||||| Sbjct 137143 TCCTGGATCTTAGACTTAACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATT 137202 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| ||||| ||||| || |||||||| Sbjct 137203 GTTTTACCAGTGAGTGTTTTGACGAAAATTTG 137234 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 || || || | |||||| || || || || |||| ||| |||||| || ||| | ||| Sbjct 137707 CTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCA 137766 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 ||||| || ||||||||||| || || || | |||||| ||||| ||||||||| Sbjct 137767 TCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTG 137826 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 ||||| ||||| ||| || | || || | ||| | | || ||||| | ||||| Sbjct 137827 TCCTGGATCTTAGACTTGACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATT 137886 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| ||||| ||||| || |||||||| Sbjct 137887 GTTTTACCAGTGAGTGTTTTGACGAAAATTTG 137918 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAA-GT 199467 |||||||| | || | || || || || || || |||| || || || || || || Sbjct 136084 CGAAGTCTTAAAACTAAATGAAGTGTAGATTCTTTCTGGATATTATAATC-GCTAAGCGT 136142 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||| |||| ||||| || || || || || | ||| || || ||| |||||| Sbjct 136143 ACGACCATCCTCCAATTGCTTCCCTGCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCC 136202 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || || ||||| |||||| | || || | ||| ||| || ||||||| Sbjct 136203 TTCCTTGTCTTGGATCTTAGACTTCACAGTCTCAACAGAGTCGTTTGGCTCCACATCCAG 136262 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || ||||| ||||| ||||||||||| Sbjct 136263 AGTGATCGTTTTTCCGGTGAGTGTTTTGACAAAAATTTG 136301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178834640900719