Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq567 84.2 2e-11 >seq567 Length=338301 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| ||| | || ||||| || | || |||||| || || ||||| || | Sbjct 137011 CCACCTCTCAACCTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTC 137070 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | ||| |||| || | ||| || ||| ||||||| | | ||||||||||| ||| Sbjct 137071 AGAGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGA 137130 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCCA 39670 | ||||| ||||| || || |||| ||| | || | ||| || || || | Sbjct 137131 ATTCCTTCCTTGTCCTGGATCTTAGACTTAACAGTCTCAACAGAGTCATTGGGC--TCAA 137188 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || | ||| ||||||||||| || | ||||| ||||| || ||||| Sbjct 137189 CATCGAGAGTGATTGTTTTACCAGTGAGTGTTTTGACGAAAATTTGCAT 137237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347345227354781