Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4076 114 2e-20 >seq4076 Length=468004 Score = 114 bits (126), Expect = 2e-20 Identities = 459/710 (65%), Gaps = 31/710 (4%) Strand=Plus/Plus Query 112299 CAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 112358 |||| ||| || ||| ||||| ||| | |||||||| ||||| ||| | || ||||| Sbjct 421547 CAAATCGAAACAGGTCAACCATTTATTGTCTACAAAGATGCCTGCAACAAGAAAAGTAAC 421606 Query 112359 CAAAAGAATTTGGGTGTGATCAAG---AGTTCCAACCTCTGTACAGAAATCTTGGAATTT 112415 |||||||| | || || ||||| ||| || || || || || || | |||| Sbjct 421607 CAAAAGAACCTTGGAGTCATCAAATCAAGT---AATCTATGCACCGAGATTGTCGAATAC 421663 Query 112416 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG 112475 | || |||| || |||||||| || | || || | || || || ||| | Sbjct 421664 AGCGATCCCAATGAAACTGCTGTGTGCAATTTGTGTTCCATTTCGCTTCCTAAATATATT 421723 Query 112476 GATCCAGAGA------CAAAG---ACATTTGATTATGAAAAACTCCACGAAGTTACGAAA 112526 || ||| |||| || || ||| | ||||| |||||| |||| ||| Sbjct 421724 GACAATAAGAAATTATCAAATCCCACCTTCAATTTCAAGAAACTTCACGAAATTACTAAA 421783 Query 112527 ACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCT 112586 | | || || | |||| ||| |||||| | |||||||| ||| ||| Sbjct 421784 ATCATTACTGTTAATATGAACAAAGTCATTGATCGCTCGTTTTACCCTGTTCCTGAAGCT 421843 Query 112587 CGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATG-- 112644 | | |||||||| | || | |||||||| | ||||| |||||| | || |||| Sbjct 421844 GGAAGATCTAATAGTCGTCATAGACCAATTGGGATAGGTGTTCAAGGTTTGGCTGATGCG 421903 Query 112645 TATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTA 112704 ||| | | | || || | | || ||||| || ||||| | ||| | ||| | Sbjct 421904 TATGTAAT-TATG-CGTTATCCTTTCGATTCAGAGGAAGCCCATGAACTTAATAAAAAAA 421961 Query 112705 TATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTT--GGCAGAGGTTGA 112762 | ||||||||||| ||||| || || |||||| | | || || | || | | | Sbjct 421962 TTTTTGAGACAATCTATCATGCTGCCCTTGAGTCTTCATGCGAATTGAGCCAAAAG--CA 422019 Query 112763 TGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATAT 112822 |||||| |||||||| | ||| || || ||||| |||||| | ||||||| ||||| Sbjct 422020 TGGTCCTTATGAAACTTATGAAGGCTCCCCAGCGAGTCAAGGGATTCTTCAATACGATAT 422079 Query 112823 GTGGGAAGGTGAGACCA--AGCTTCACTACGACTGGGACGCTCTCAAGGAACGCA--TCA 112878 ||||| | || | |||| || || | | || ||||| | | |||||| | ||| Sbjct 422080 GTGGGGA-GTAACACCATCAGATTTA-TGGGATTGGGATGGCTTGAAGGAAAATATTTCA 422137 Query 112879 AGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCAC 112938 | | | || | ||||||||||| |||| | ||||| || || ||||| | | Sbjct 422138 A--AATATGGCTTACGTAACAGTCTATTGACTACTTGTATGCCCACTGCATCCACATCTC 422195 Query 112939 AAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 112988 |||| || || || ||||| | | ||||| | || | || |||||| Sbjct 422196 AAATATTTGGAAACAATGAGTCCACAGAACCTTTTACCAGCAATATCTAT 422245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620697729825040