Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4076 150 2e-31 >seq4076 Length=468004 Score = 150 bits (166), Expect = 2e-31 Identities = 454/685 (66%), Gaps = 37/685 (5%) Strand=Plus/Minus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 |||||| || | || | ||||| | | ||||| || || || ||||| | ||||| Sbjct 422245 ATAGATATTGCTGGTAAAAGGTTCTGTGGACTCATTGTTTCCAAATATTTGAGATGTGGA 422186 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGA--TGCGT 106051 || || ||||| | |||| ||||||||||| | || | || |||| | | Sbjct 422185 TGCAGTGGGCATACAAGTAGTCAATAGACTGTTACGTAAGCCATATT--TTGAAATATTT 422128 Query 106052 TCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAAATT 106109 ||||| | ||||||| || | | | || |||| | || | |||||||||| ||| Sbjct 422127 TCCTTCAAGCCATCCCAATCCCA-TAAATCTGATGGTGTTAC-TCCCCACATATCGTATT 422070 Query 106110 GAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG 106169 |||| | |||||| || || || || ||| | || ||||| | ||| || || Sbjct 422069 GAAGAATCCCTTGACTCGCTGGGGAGCCTTCATAAGTTTCATAAGGACCATGCTTTTGGC 422010 Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 |||||| || | ||| |||| || ||||| || || ||||| || ||| | Sbjct 422009 TCAATTCGCATGAAGACTCAAGGGCAGCATGATAGATTGTCTCAAAAATTTTTTTATTAA 421950 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATAC--ATCCGCGAG 106287 || | |||||| |||||||| || | || || || || || |||| ||| || | Sbjct 421949 GTTCATGGGCTTCCTCTGAATCGAAAGGATAACG-CATAAT-TACATACGCATCAGCCAA 421892 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC--- 106344 |||||||||||| | ||||| ||||| || || ||||||| ||| ||| || Sbjct 421891 ACCTTGAACACCTATCCCAATTGGTCTATGACGACTATTAGATCTTC---CAGCTTCAGG 421835 Query 106345 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404 ||| || ||||| | ||||||||| ||| | ||| |||| || || || || Sbjct 421834 AACAGGGTAAAACGAGCGATCAATGACTTTGTTCATATTAACAGTAATGATTTTAGTAAT 421775 Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCG-------AGTCTCTTCATTG---ACATACT 106454 ||| |||||||| | ||| || ||| | | | |||| |||| | ||| | Sbjct 421774 TTCGTGAAGTTTCTTGAAATTGAAGGTGGGATTTGATAATTTCTT-ATTGTCAATATATT 421716 Query 106455 TTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTA 106514 | ||||| | || || ||||||||| ||||| || |||| ||| |||| || | Sbjct 421715 TAGGAAGCGAAATGGAACACAAATTGCACACAGCAGTTTCATTGGGATCGCTGTATTCGA 421656 Query 106515 AAATTTCTGTACACAAGTTGGAACT---CTTAATCGTCCCCAA-ATTCTTTTGGTTACTC 106570 ||| || || || | || ||| || || | | |||| |||||||||||||| Sbjct 421655 CAATCTCGGTGCATAGATT---ACTTGATTTGAT-GACTCCAAGGTTCTTTTGGTTACTT 421600 Query 106571 TTTTTGTTGCACGCATCCTTGTAGA 106595 || |||||||| ||||| ||||||| Sbjct 421599 TTCTTGTTGCAGGCATCTTTGTAGA 421575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589938343506680