Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq567 123 6e-23 >seq567 Length=338301 Score = 123 bits (136), Expect = 6e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| |||||||| || || || |||||||||||| | ||| | ||||| || Sbjct 137484 AACCAAGTGGAGAGTGGATTCCTTCTGGATATTGTAATCGCTTAAAGTGCGACCATCCTC 137543 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||| || |||||||| || |||| ||||| ||||| ||||| ||||| |||||||| Sbjct 137544 AAGCTGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCCTTGTCTTG 137603 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || || || |||||| | ||| ||||| || || |||| ||||| Sbjct 137604 AATCTTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTT 137663 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || ||||| ||||| | |||||| Sbjct 137664 ACCGGTTAAGGTTTTCACGAAAATCTGCATT 137694 Score = 114 bits (126), Expect = 3e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| ||||| || ||||| || ||||| || ||| |||||| | ||||| || Sbjct 137940 AACCAAGTGGAGAGTAGATTCTTTCTGGATATTATAGTCGTTAAGAGTGCGACCATCCTC 137999 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| |||||||| || |||| ||||||||||| ||||| ||||| |||||||| Sbjct 138000 AAGTTGCTTTCCTGCGAAAATGAGTCTCTGTTGGTCTGGCGGAATACCTTCCTTGTCTTG 138059 Query 195051 AATTTTTTGCTTGACGTTCTC 195071 ||| || |||||| |||| Sbjct 138060 AATCTTAGATTTGACGGTCTC 138080 Score = 105 bits (116), Expect = 1e-17 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| ||||| || || || || ||||| || || ||||| | || ||||| Sbjct 136323 AACTAAGTGGAGAGTAGATTCCTTCTGGATATTATAGTCACTCAGAGTGCGGCCGTCTTC 136382 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||||| || || || |||| ||||| || || ||||| ||||| || ||||| Sbjct 136383 AAGCTGCTTACCGGCAAAAATCAGTCTCTGTTGATCAGGGGGAATTCCTTCCTTATCTTG 136442 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| || |||||| | ||| ||||| || || |||| ||||| Sbjct 136443 AATCTTAGACTTCACAGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTT 136502 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || ||||| ||||| | |||||| Sbjct 136503 ACCGGTTAAGGTTTTCACGAAAATCTGCATT 136533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109399762903619