Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq567 159 3e-34 >seq567 Length=338301 Score = 159 bits (176), Expect = 3e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101257 TAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATC 101316 ||||||||||||||| ||||||||||| || ||||| |||||| | || | |||| Sbjct 136092 TAAAACTAAATGAAGTGTAGATTCTTTCTGGATATTATAATCGCTAAGCGTACGACCATC 136151 Query 101317 GTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATC 101376 ||||||||||| |||||||| |||| | |||||||||||| ||||| ||||| || || Sbjct 136152 CTCCAATTGCTTCCCTGCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCCTTCCTTGTC 136211 Query 101377 TTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGT 101436 ||| || || || ||| | || |||| ||| | ||||| || ||||||| ||| Sbjct 136212 TTGGATCTTAGACTTCACAGTCTCAACAGAGTCGTTTGGCTCCACATCCAGAGTGATCGT 136271 Query 101437 TTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| ||||| | ||||| ||||| || ||||| Sbjct 136272 TTTTCCGGTGAGTGTTTTGACAAAAATTTGCAT 136304 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || || | ||| || || || ||||||||||| || || || |||||| Sbjct 137239 CCACCTCTCAATCGAAGAACCAAGTGGAGAGTAGATTCTTTCTGGATGTTATAATCGCTA 137298 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||||||| || || ||||| |||| | ||||||||| || ||| Sbjct 137299 AGTGTGCGACCATCCTCCAATTGTTTCCCGGCAAAAATCAGTCTCTGTTGATCAGGAGGA 137358 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| ||||| |||||| | || |||| ||| | || || Sbjct 137359 ATTCCTTCCTTGTCTTGGATTTTAGACTTTACAGTCTCGACAGAATCATTGGGCTCAACA 137418 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| ||||||||| || | ||||| ||||| || ||||| Sbjct 137419 TCAAGGGTGATCGTTTTGCCAGTAAGTGTTTTAACAAAGATTTGCAT 137465 Score = 123 bits (136), Expect = 2e-23 Identities = 159/218 (73%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 101253 AACGTAA-AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 ||| ||| |||||| || || |||||||| || || ||||| || || | ||| | | Sbjct 136315 AACCTAAGAACTAAGTGGAGAGTAGATTCCTTCTGGATATTATAGTCACTCAGAGTGCGG 136374 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 | || || | |||||||| ||||| |||| | ||||||||| || ||||| ||||| Sbjct 136375 CCGTCTTCAAGCTGCTTACCGGCAAAAATCAGTCTCTGTTGATCAGGGGGAATTCCTTCC 136434 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 ||||||||||| || || ||| | || |||| ||| | ||||| || ||||| Sbjct 136435 TTATCTTGAATCTTAGACTTCACAGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTA 136494 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || || |||||||| ||||| || || |||||||| Sbjct 136495 ATTGTCTTACCGGTTAAGGTTTTCACGAAAATCTGCAT 136532 Score = 120 bits (132), Expect = 2e-22 Identities = 158/218 (72%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 101253 AACGTAA-AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 ||| ||| ||| || || || || ||||| || || |||||||||||| | ||| | Sbjct 137476 AACCTAAGAACCAAGTGGAGAGTGGATTCCTTCTGGATATTGTAATCGCTTAAAGTGCGA 137535 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 |||| || | || || ||||| || |||| | ||||||||| || ||||| ||||| Sbjct 137536 CCATCCTCAAGCTGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCC 137595 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 || |||||||| || |||||| | || |||| ||| | ||||| || ||||| Sbjct 137596 TTGTCTTGAATCTTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTA 137655 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || || |||||||| ||||| || || |||||||| Sbjct 137656 ATTGTCTTACCGGTTAAGGTTTTCACGAAAATCTGCAT 137693 Score = 118 bits (130), Expect = 8e-22 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || || | ||| || || || ||||||||||| || ||||| || ||| Sbjct 137923 CCACCTCTCAATCGAAGAACCAAGTGGAGAGTAGATTCTTTCTGGATATTATAGTCGTTA 137982 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || | |||||| ||||| || || | | |||||| || |||||| Sbjct 137983 AGAGTGCGACCATCCTCAAGTTGCTTTCCTGCGAAAATGAGTCTCTGTTGGTCTGGCGGA 138042 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTAC---AGTGTCAGACGTTTCC 101419 || ||||| || |||||||| || ||| || | || || | ||||| | || Sbjct 138043 ATACCTTCCTTGTCTTGAATCTTAGATTTGACGGTCTCGACCGAATCGTCAGGC---TCT 138099 Query 101420 ACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| | |||||||| || || || || |||||||||||||| Sbjct 138100 ACATCGAGAGTTATAGTTTTGCCAGTCAACGTCTTCACAAATATCTGCAT 138149 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | ||| || || |||||||||||||| || || || || || Sbjct 137009 TTCCACCTCTCAACCTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCAC 137068 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | |||| || | |||||| || ||||| |||| | ||| ||||| || | Sbjct 137069 TCAGAGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGG 137128 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| ||||| || || || || || || ||| | || |||| |||| | || | Sbjct 137129 GAATTCCTTCCTTGTCCTGGATCTTAGACTTAACAGTCTCAACAGAGTCATTGGGCTCAA 137188 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || ||||||| ||||| || || | ||||| || || || ||||| Sbjct 137189 CATCGAGAGTGATTGTTTTACCAGTGAGTGTTTTGACGAAAATTTGCAT 137237 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | ||| || || |||||||||||||| || || || || || Sbjct 137693 TTCCACCTCTCAACCTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCAC 137752 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | |||| || | |||||| || ||||| |||| | ||| ||||| || | Sbjct 137753 TCAGAGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGG 137812 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| ||||| || || || || || || ||| | || |||| |||| | || | Sbjct 137813 GAATTCCTTCCTTGTCCTGGATCTTAGACTTGACAGTCTCAACAGAGTCATTGGGCTCAA 137872 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || ||||||| ||||| || || | ||||| || || || ||||| Sbjct 137873 CATCGAGAGTGATTGTTTTACCAGTGAGTGTTTTGACGAAAATTTGCAT 137921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396250595745249