Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4076 107 4e-18 >seq4076 Length=468004 Score = 107 bits (118), Expect = 4e-18 Identities = 303/463 (65%), Gaps = 7/463 (2%) Strand=Plus/Minus Query 213780 GGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACC 213839 |||||||| || | |||||||||||| || ||||| | |||||||| ||||| | | Sbjct 421416 GGACACATCAGACACCAGTCCCCGTCTTCCTCAACTCTTTTCATGAACAAATCCGGCATC 421357 Query 213840 CACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGA 213899 || || ||| || | ||||||| ||| || || |||| | || || | || Sbjct 421356 CAAAGAGCGAGAAATAAATCCCTGGCCCTAACTTCCTCGGCTCCCGTATTCTTCCTGAGT 421297 Query 213900 TCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGC 213959 || || || || || || || |||||||| || || | || || ||||| | || ||| Sbjct 421296 TCAAGGAATTCGAAAATATCAGCGTGCCAGGGTTCAAGATAAATAGCAAAAGATCCTGGC 421237 Query 213960 CTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGT 214016 |||||| || || || || || | || | ||||||| | | || | ||| Sbjct 421236 CTCTTGTTACCACCTTGATCGACGTAACGGGATGCGTTGTTGAATACCCTAAGCATTGGT 421177 Query 214017 ACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGT-- 214074 || || ||||| || ||| ||||| |||||| | || || ||||| | | || Sbjct 421176 ACGAGACCGTTAGAAGTGCCGCACGTTCCAGCTATAAATGAACCAGAGGCTCGAATGTTG 421117 Query 214075 TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAG 214134 ||| |||| | ||| || ||||| || ||||| || || ||||| |||| | Sbjct 421116 TGCACATG--TAACCCGATTCCACCAGCATACTTAGAAATGGCCGCGCATTCGCTCAATG 421059 Query 214135 TCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCT 214194 | || | || || |||||||||||| | | | | ||||||||| || | | || Sbjct 421058 TGTCGAAAATACCCTTGATGCTGTCATCTTTCATGGCAATCAAGAAGCAACTAGCCAACT 420999 Query 214195 GGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATG 214237 || | | ||| |||| ||||| | || ||| | || || Sbjct 420998 GGCCACAGTTCGAACCAGCATTGAACAATGTCGGGGTAGCGTG 420956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931465764570880