Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_019934.1 Length=39012 Score E Sequences producing significant alignments: (Bits) Value seq2570 150 4e-32 seq1868 89.7 1e-13 >seq2570 Length=4711 Score = 150 bits (166), Expect = 4e-32 Identities = 326/476 (68%), Gaps = 24/476 (5%) Strand=Plus/Plus Query 36466 CCAGCCGTGTCGTATAACACGGCGACAGCATTTCCCGCTTCATCTGCCACGCCTGCTGGA 36525 ||||| | || ||||| ||| |||||||||||||| ||||||||||| || || | Sbjct 4242 CCAGCGG-GTGGTATATGCCGGTGACAGCATTTCCCGTTTCATCTGCCATTCCGGCGCAA 4300 Query 36526 TACCCTGCCCCGCAAAATAGAGCGTTCCCCTGCCCTG-CTGGTTGAGTCTGTCCATCAGT 36584 ||||| | || ||||| ||| | ||||| | || | || || | | ||| | || Sbjct 4301 TACCCCGTCCGGCAAACCAGA-CTTTCCCGAGTCCGGAATGATTAATGCCGTCGAGCACC 4359 Query 36585 GACATCAGCGCCTCGCTGTTCGCGCGCGGCGCGTTCTCGTCA---AACAGGTTCAGCTGC 36641 ||||||||| ||||||| ||| || ||| | | ||||| ||||| |||| |||| Sbjct 4360 TTCATCAGCGCATCGCTGTGCGCCCGTGGC---TGCACGTCATCGAACAGATTCAACTGC 4416 Query 36642 GCCACGCC---CTGGCTGAAAAAGTCACCCAGCATAACGCCCGCCTTCTGGTACCGGTGG 36698 | ||||| | | |||||| ||| ||||||| ||||| || ||| |||||| Sbjct 4417 ACAACGCCGTTCGGACTGAAA---TCATTGAGCATAATCCCCGCTTTTGCGTAGCGGTGG 4473 Query 36699 CCGTCGCGCCAGACCGCATCAAGGCAGCCCGTCGCCGCGGCGATAATGTCGCGCGTGTCC 36758 || ||| |||||| | | || | | ||| || ||||||||||| || ||||| Sbjct 4474 CCCTCGAGCCAGATCCTGTTCAGAGACCTGACCGCTGCCGCGATAATGTCCCGGGTGTCA 4533 Query 36759 TGTGTGGGCGTCAGGAGCTTAGTCCCGGCGTGGTTGCCGTAATACGGTTC---AGCAGAG 36815 | || || || || || | ||| ||| ||||| |||||||| | | | Sbjct 4534 CGGGTAGGGGTGTTCAGTTTCTCCGTGGCCACGTTACCGTAGTACGGTTCATTAACCGCA 4593 Query 36816 AACGGCGACGTTTTCACGAA--CACCGAAATGTACCGGCAGAACTGATGCTCGCCGCGGA 36873 || || || || || | ||| | || ||| ||||||| |||| |||| ||||| | Sbjct 4594 AAAGGAGAAGTCTTGATGAAGGTGCTGATATG--CCGGCAGTACTGCCGCTCACCGCGCA 4651 Query 36874 GCTTTTCCGCCGCGCGCGCTGCATAGCTGCAGATAGCCTGGCGCATCGCTTCATAG 36929 | |||||||||| ||| | ||||| ||||| ||||||||||| |||| ||| Sbjct 4652 AC-TTTCCGCCGCTCGCTCGGCATACTGGCAGACGGCCTGGCGCAT-TCTTCGTAG 4705 >seq1868 Length=2677 Score = 89.7 bits (98), Expect = 1e-13 Identities = 168/238 (71%), Gaps = 7/238 (3%) Strand=Plus/Minus Query 36454 TCGGCACATCAGCCAGCCGTGTCGTATAACACGGCGACAGCATTTCCCGCTTCATCTGCC 36513 |||| | |||| || || || ||||| | ||||||||||||||| ||||||||||||| Sbjct 613 TCGGAATATCATTCATTCGCGTTGTATAGCGCGGCGACAGCATTTCGCGCTTCATCTGCC 554 Query 36514 ACGC-CTG-CTGGAT-ACCCTGCCCCGCAAAATAGAGCGTTCCCCTGCCCTG-CTGGTTG 36569 | || ||| | | | ||||| ||||| ||| | | |||| || ||||| | ||| Sbjct 553 ATGCACTGTCACGCTCTCCCTGGCCCGCGAAAAAAACTTTTCCTCT-CCCTGAACGATTG 495 Query 36570 AGTCTGTCCATCAGTGACATCAGCGCCTCGCTGTTCGCGCGCGGCGCGTTCTCGTCAAAC 36629 | | ||||| | | ||| | ||| || || || |||||| | ||| ||| Sbjct 494 ATGCCGTCCAGCGCGGCCATTAACGCATCTGCATTTGCACGCGGCTGCTGCTCACTGAAC 435 Query 36630 AGGTTCAGCTGCGCCACGCCCTGGCT-GAAAAAGTCACCCAGCATAACGCCCGCCTTC 36686 | || | ||| |||||| |||| || | |||| ||||||||||| ||||| || ||| Sbjct 434 ATGTCGAACTGTGCCACG-CCTGACTGGTAAAAATCACCCAGCATGACGCCGGCTTTC 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124708273813916