Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq567 98.7 8e-16 >seq567 Length=338301 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| |||||| | || || ||||| || ||| || || || Sbjct 137465 ATGCAAATCTTTGTTAAAACACTTACTGGCAAAACGATCACCCTTGATGTTGAGCCCAAT 137406 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || | || | | | ||| |||||| ||||| || ||| | || |||||| Sbjct 137405 GATTCTGTCGAGACTGTAAAGTCTAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAA 137346 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 28731 |||||||| || ||||| || ||||||||||| ||| || | ||| | |||||||| Sbjct 137345 CAGAGACTGATTTTTGCCGGGAAACAATTGGAGGATGGTCGCACACTTAG--CGATTATA 137288 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||| || |||||||||||||| ||| |||| | |||| |||| || || Sbjct 137287 ACATCCAGAAAGAATCTACTCTCCACTTGGTTCTTCGATTGAGAGGTGGTAT 137236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425374952136903