Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4076 165 1e-35 >seq4076 Length=468004 Score = 165 bits (182), Expect = 1e-35 Identities = 443/664 (67%), Gaps = 35/664 (5%) Strand=Plus/Plus Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 ||||| ||| | ||||| ||||| || |||||||| |||||||||||||| | ||| Sbjct 421564 ACCATTTATTGTCTACAAAGATGCCTGCAACAAGAAAAGTAACCAAAAGAACCTTGGAGT 421623 Query 75976 AATCAAGAGCTCA---AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGAC 76032 ||||| ||| ||||| ||||| || ||| | || |||| ||| |||| || Sbjct 421624 CATCAA---ATCAAGTAATCTATGCACCGAGATTGTCGAATACAGCGATCCCAATGAAAC 421680 Query 76033 GGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTA---TGTCAATGAAGA------ 76083 ||||| ||||||||| || || | ||||| || || || |||| |||| Sbjct 421681 TGCTGTGTGCAATTTGTGTTCCATTTCGCTTCCTAAATATATTGACAAT-AAGAAATTAT 421739 Query 76084 -GACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATC 76142 | || ||| || ||| | |||||||| ||||| || || || |||| ||| Sbjct 421740 CAAATCCCACCTTCAATTTCAAGAAACTTCACGAAATTACTAAAATCATTACTGTTAATA 421799 Query 76143 TAAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATA 76199 | ||| ||||||||| | ||||| || || ||| ||| ||| ||||||| Sbjct 421800 TGAACAAAGTCATTGATCGCTCGTTTTACCCTGTTCCTGAAGCTG---GAAGATCTAATA 421856 Query 76200 TGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGAT--GTATTTATTTTGTG 76257 || || ||||| ||||| | |||||||||||| | || ||| |||| || || || Sbjct 421857 GTCGTCATAGACCAATTGGGATAGGTGTTCAAGGTTTGGCTGATGCGTATGTA-ATTATG 421915 Query 76258 CCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCAT 76317 || || | || |||||||| |||||| | || | ||| || ||||| || || Sbjct 421916 -CGTTATCCTTTCGATTCAGAGGAAGCCCATGAACTTAATAAAAAAATTTTTGAGACAAT 421974 Query 76318 GTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGAC 76377 ||||| || |||| ||| | || |||||| || || ||| | ||||| || Sbjct 421975 CTATCATGCTGCCCTTGAGTCTTCATGCGAATTGAGCCAAAAGCATGGTCCTTATGAAAC 422034 Query 76378 ATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAAC 76437 | ||| || || || ||| |||||| | ||||| | |||||||||| | || | || Sbjct 422035 TTATGAAGGCTCCCCAGCGAGTCAAGGGATTCTTCAATACGATATGTGGGGA-GTAACAC 422093 Query 76438 CA--AGCTCAACTACGACTGGGATGTTCTCAAGGAACGCA--TCAAGGAGAAGGGTCTTC 76493 || || | | | || ||||||| | |||||| | |||| | | || | | Sbjct 422094 CATCAGATTTA-TGGGATTGGGATGGCTTGAAGGAAAATATTTCAA--AATATGGCTTAC 422150 Query 76494 GTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATA 76553 |||||||||| |||| | ||||| || || ||||| | ||||| || || || | Sbjct 422151 GTAACAGTCTATTGACTACTTGTATGCCCACTGCATCCACATCTCAAATATTTGGAAACA 422210 Query 76554 ATGA 76557 |||| Sbjct 422211 ATGA 422214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596526669360160