Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq567 152 9e-32 >seq567 Length=338301 Score = 152 bits (168), Expect = 9e-32 Identities = 176/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||||||| |||| || | |||| ||||| || || Sbjct 137229 AATTTGCATACCACCTCTCAATCGAAGAACCAAGTGGAGAGTAGATTCTTTCTGGATGTT 137288 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| ||| | || | | ||| || |||||||| ||||||||||| | ||||||||| Sbjct 137289 ATAATCGCTAAGTGTGCGACCATCCTCCAATTGTTTCCCGGCAAAAATCAGTCTCTGTTG 137348 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| |||||||| || ||||| ||||| | |||| | | | || ||| Sbjct 137349 ATCAGGAGGAATTCCTTCCTTGTCTTGGATTTTAGACTTTACAGTCTCGACAGAATCATT 137408 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||| || || || || ||||| || || || ||||| ||||| |||||||| Sbjct 137409 GGGCTCAACATCAAGGGTGATCGTTTTGCCAGTAAGTGTTTTAACAAAGATTTGCAT 137465 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||||||||||||||| |||| || | |||| ||||| ||||| Sbjct 137913 AATTTGCATCCCACCTCTCAATCGAAGAACCAAGTGGAGAGTAGATTCTTTCTGGATATT 137972 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||||| | || | | ||| || | ||| ||||| || ||||| | ||||||||| Sbjct 137973 ATAGTCGTTAAGAGTGCGACCATCCTCAAGTTGCTTTCCTGCGAAAATGAGTCTCTGTTG 138032 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || ||||| || ||||| || || | ||| | | | | |||| Sbjct 138033 GTCTGGCGGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGGTCTCGACCGAATCGTC 138092 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||| || || |||||||||||||| || || | ||| || |||||||| ||||| Sbjct 138093 AGGCTCTACATCGAGAGTTATAGTTTTGCCAGTCAACGTCTTCACAAATATCTGCAT 138149 Score = 111 bits (122), Expect = 3e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 193157 ATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTG 193216 ||| | ||||| ||||| |||||||| ||| | ||| | | ||| || ||||| Sbjct 136101 ATGAAGTGTAGATTCTTTCTGGATATTATAATCGCTAAGCGTACGACCATCCTCCAATTG 136160 Query 193217 TTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTT 193276 || || |||||||| | |||||||||||| ||||| |||||||| || ||||| || || Sbjct 136161 CTTCCCTGCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCCTTCCTTGTCTTGGATCTT 136220 Query 193277 GGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGT 193336 | || | | | || || ||| | ||| || || ||||| || ||||| || || Sbjct 136221 AGACTTCACAGTCTCAACAGAGTCGTTTGGCTCCACATCCAGAGTGATCGTTTTTCCGGT 136280 Query 193337 TAGCGTTTTTACAAATATTTGCAT 193360 || ||||| ||||| |||||||| Sbjct 136281 GAGTGTTTTGACAAAAATTTGCAT 136304 Score = 107 bits (118), Expect = 3e-18 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| ||||| | ||| |||| || | || | || || ||||| Sbjct 137458 ATTTGCATACCACCCCTCAACCTAAGAACCAAGTGGAGAGTGGATTCCTTCTGGATATTG 137517 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || ||| ||| || | | ||| || | |||||||| || ||||| | |||||||||| Sbjct 137518 TAATCGCTTAAAGTGCGACCATCCTCAAGCTGTTTTCCTGCGAAAATCAGTCTCTGTTGA 137577 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || |||||||| || ||||| || || | ||||| | || || ||| Sbjct 137578 TCTGGGGGAATTCCTTCCTTGTCTTGAATCTTAGATTTTACCGTCTCAACAGAGTCGTTG 137637 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | ||| || || ||||| || || ||||| |||| ||||| || || || |||||| Sbjct 137638 GGCTCCACATCCAGAGTAATTGTCTTACCGGTTAAGGTTTTCACGAAAATCTGCATT 137694 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||| | ||| |||| || | |||| ||||| || |||||||| Sbjct 137008 ATTCCACCTCTCAACCTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCA 137067 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || | ||| || | ||| |||||||||||||| | |||||| ||||| || Sbjct 137068 CTCAGAGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGG 137127 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| || || || || || | || | | | || || || | |||| Sbjct 137128 GGAATTCCTTCCTTGTCCTGGATCTTAGACTTAACAGTCTCAACAGAGTCATTGGGCTCA 137187 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || |||||||| || || ||||| || || |||||||| Sbjct 137188 ACATCGAGAGTGATTGTTTTACCAGTGAGTGTTTTGACGAAAATTTGCAT 137237 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||| | ||| |||| || | |||| ||||| || |||||||| Sbjct 137692 ATTCCACCTCTCAACCTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCA 137751 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || | ||| || | ||| |||||||||||||| | |||||| ||||| || Sbjct 137752 CTCAGAGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGG 137811 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| || || || || || | || | | | || || || | |||| Sbjct 137812 GGAATTCCTTCCTTGTCCTGGATCTTAGACTTGACAGTCTCAACAGAGTCATTGGGCTCA 137871 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || |||||||| || || ||||| || || |||||||| Sbjct 137872 ACATCGAGAGTGATTGTTTTACCAGTGAGTGTTTTGACGAAAATTTGCAT 137921 Score = 100 bits (110), Expect = 5e-16 Identities = 165/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| ||||| | ||| || | || | |||| || || ||||| Sbjct 136296 AATTTGCATACCACCCCTCAACCTAAGAACTAAGTGGAGAGTAGATTCCTTCTGGATATT 136355 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| | || | || || | || || ||||||||||| | ||||||||| Sbjct 136356 ATAGTCACTCAGAGTGCGGCCGTCTTCAAGCTGCTTACCGGCAAAAATCAGTCTCTGTTG 136415 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| |||||||| || || | || | | | || || ||| Sbjct 136416 ATCAGGGGGAATTCCTTCCTTATCTTGAATCTTAGACTTCACAGTCTCAACAGAGTCGTT 136475 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | ||| || || ||||| || || ||||| |||| ||||| || || || |||||| Sbjct 136476 GGGCTCCACATCCAGAGTAATTGTCTTACCGGTTAAGGTTTTCACGAAAATCTGCATT 136533 Score = 89.7 bits (98), Expect = 9e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 |||||||| || ||||| | |||||||||||| || || |||||||| || ||||| || Sbjct 136864 TGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGAATC 136923 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 || | ||||| | || || ||| | ||| || || ||||| || || ||||| Sbjct 136924 TTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTTACCG 136983 Query 193335 GTTAGCGTTTTTACAAATATTTGCATT 193361 |||| ||||| || || || |||||| Sbjct 136984 GTTAAGGTTTTCACGAAAATCTGCATT 137010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899589658620240