Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2870 125 1e-22 >seq2870 Length=981041 Score = 125 bits (138), Expect = 1e-22 Identities = 177/245 (72%), Gaps = 8/245 (3%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || || || |||||| | || || || || ||| Sbjct 497945 TGTACTTGGTGACAGCCTTGGTTCCTTCAGACACTGCGTGCTTAGCAAGCTCACCAGGCA 497886 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTG--CGCTTGTT--A 1485585 || || | |||||||||||||| || | | | ||| ||||| | |||||| | Sbjct 497885 GAATAAGTCTGACGGCGGTCTGGATTTCCCTAGAGGAGAT--TGTTGATCTCTTGTTGTA 497828 Query 1485586 GTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAG 1485645 ||| | | || | ||||||||| ||||||| |||| ||||| ||||| |||||| Sbjct 497827 GTGGGAG--AGTCTTGAGGCCTCGGTAGCGATGCGCTCGAAGATGTCATTGACGAACGAG 497770 Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705 |||||||| ||||| | || |||||| || ||| ||||| || || | || || Sbjct 497769 TTCATGATTGACATAGCCCTGGAGGAGATTCCAGTGTCAGGGTGAACTTGTCTAAGAACT 497710 Query 1485706 TTGTA 1485710 ||||| Sbjct 497709 TTGTA 497705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915634001652323