Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq567 111 1e-19 >seq567 Length=338301 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||||||| || |||| ||| | ||| || ||||| ||||||||||| Sbjct 137693 TTCCACCTCTCAACCTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCAC 137752 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 || |||| |||| || |||||||||||||| || ||||||| ||||| || | | Sbjct 137753 TCAGAGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGG 137812 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || |||||||| | || || ||||| | | | || ||||||| ||| | Sbjct 137813 GAATTCCTTCCTTGTCCTGGATCTTAGACTTGACAGTCTCAACAGAGTCATTGGGCTCAA 137872 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| | || || || || || ||||| || || || || || ||||| Sbjct 137873 CATCGAGAGTGATTGTTTTACCAGTGAGTGTTTTGACGAAAATTTGCAT 137921 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||||||| || |||| ||| | ||| || ||||| ||||||||||| Sbjct 137009 TTCCACCTCTCAACCTAAGAACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCAC 137068 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 || |||| |||| || |||||||||||||| || ||||||| ||||| || | | Sbjct 137069 TCAGAGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGG 137128 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || |||||||| | || || || || | | | || ||||||| ||| | Sbjct 137129 GAATTCCTTCCTTGTCCTGGATCTTAGACTTAACAGTCTCAACAGAGTCATTGGGCTCAA 137188 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| | || || || || || ||||| || || || || || ||||| Sbjct 137189 CATCGAGAGTGATTGTTTTACCAGTGAGTGTTTTGACGAAAATTTGCAT 137237 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || ||||| | || |||| ||| | || || ||||| || |||||||| Sbjct 137923 CCACCTCTCAATCGAAGAACCAAGTGGAGAGTAGATTCTTTCTGGATATTATAGTCGTTA 137982 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || ||||||||||| ||||| || |||| || |||||| |||| Sbjct 137983 AGAGTGCGACCATCCTCAAGTTGCTTTCCTGCGAAAATGAGTCTCTGTTGGTCTGGCGGA 138042 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || |||||||| | | ||| || | | ||| ||| Sbjct 138043 ATACCTTCCTTGTCTTGAATCTTAGATTTGACGGTCTCGACCGAATCGTCAGGCTCTACA 138102 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||||| || || || || | ||||| ||||| |||||||| Sbjct 138103 TCGAGAGTTATAGTTTTGCCAGTCAACGTCTTCACAAATATCTGCAT 138149 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||||||| || |||| ||| | ||| |||||||| || || || || | Sbjct 137467 CCACCCCTCAACCTAAGAACCAAGTGGAGAGTGGATTCCTTCTGGATATTGTAATCGCTT 137526 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | |||| |||| || || || ||||| ||||| ||||||| || || ||| | || Sbjct 137527 AAAGTGCGACCATCCTCAAGCTGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGA 137586 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || ||| || | | | || || |||| ||| ||| Sbjct 137587 ATTCCTTCCTTGTCTTGAATCTTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACA 137646 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || ||||| || || | ||| || || || |||||||| Sbjct 137647 TCCAGAGTAATTGTCTTACCGGTTAAGGTTTTCACGAAAATCTGCAT 137693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325669948273583