Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq567 140 5e-28 >seq567 Length=338301 Score = 140 bits (154), Expect = 5e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || |||||||| || ||| | ||||| || | |||| Sbjct 136303 TGCAAATTTTTGTCAAAACACTCACCGGAAAAACGATCACTCTGGATGTGGAGCCAAACG 136244 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | | ||| || ||| || ||| || ||||| ||||| |||||||||| Sbjct 136243 ACTCTGTTGAGACTGTGAAGTCTAAGATCCAAGACAAGGAAGGAATTCCTCCCGATCAAC 136184 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| ||||||||||| || ||||| || ||| | | ||| | | |||||||||| Sbjct 136183 AGAGACTGATTTTTGCAGGGAAGCAATTGGAGGATGGTCGTACGCTTAGCGATTATAATA 136124 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 | || |||||||| || | |||||||| ||| || Sbjct 136123 TCCAGAAAGAATCTACACTTCATTTAGTTTTAAGA 136089 Score = 118 bits (130), Expect = 2e-21 Identities = 164/227 (72%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || || || || ||||| || ||| | |||||||| | | ||| Sbjct 138148 TGCAGATATTTGTGAAGACGTTGACTGGCAAAACTATAACTCTCGATGTAGAGCCTGACG 138089 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 || | | | | || ||| ||| || ||| || ||||| ||||| || || |||| Sbjct 138088 ATTCGGTCGAGACCGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCGCCAGACCAAC 138029 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAAC-GTTAACAGATTATAAT 146210 | ||||||||||| ||||| || ||| | || ||| | | || ||||| || |||||| Sbjct 138028 AGAGACTCATTTTCGCAGGAAAGCAACTTGAGGATGGTCGCACTCTTAAC-GACTATAAT 137970 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || || |||||||| ||| |||| || || | ||||| ||||| || Sbjct 137969 ATCCAGAAAGAATCTACTCTCCACTTGGTTCTTCGATTGAGAGGTGG 137923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786109825500440