Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq3075 297 2e-75 >seq3075 Length=30624 Score = 297 bits (328), Expect = 2e-75 Identities = 897/1362 (66%), Gaps = 64/1362 (5%) Strand=Plus/Plus Query 25457 ATATCTGGATCATTCCACGCAAGACTACACTCTGAAGTC--GGATCGTAATATTCTGTAC 25514 ||||| ||||||||| || || | ||| || || |||| || || ||||| | Sbjct 14418 ATATCCACATCATTCCATAAAATACATCCCTC--AAATCCTGGATTATAGTAATCTGTGC 14475 Query 25515 ATTTGTATTCAAAATCAGCAATATCACTAATCACAACAAAGCCATGAGCGAAACCAGGAG 25574 |||| |||||||||||||| || || | ||||||||| |||||||| || || || | Sbjct 14476 ATTTATATTCAAAATCAGCTATGTCGGATAGCACAACAAAACCATGAGCCAAGCCTGGTG 14535 Query 25575 GAATCCAAAATTGTGTTTTATTCTTTTCAGATAAGAGAACACCTACCCATTCTCCAAATG 25634 | ||||| ||||| ||||| || | ||| || | | || ||| |||||| ||||| | Sbjct 14536 GTATCCAGAATTGAGTTTTGTTTTCTTCTGAAAGAATTACCCCTTCCCATTGGCCAAAAG 14595 Query 25635 TTGGACTACCAACCCTAATATCTACAGCAACATCATAAACTTCACCACGAACACAGCGTA 25694 | || || |||||||| || |||||||| |||||||||||||||| || | Sbjct 14596 TAGGTGATTCAGGTCTAATATCAACTGCAACATCGAAAACTTCACCACGAACCACCCGAA 14655 Query 25695 CCAACTTCCCTTGTGGGTTTTTCTTTTGAAAATGAAGCCCACGTAGAACTCCTCGGATAG 25754 | || || || || | | | | ||||||||||||| || || || |||||| | | Sbjct 14656 CTAATTTACCCTGCGCATGCTGCGTTTGAAAATGAAGTCCGCGAAGGACTCCTTTCGTTG 14715 Query 25755 AACGTGAATGGTTATCTTGGACAAAGTTTTGTTTACCTATGTATTGATCATAT----AAA 25810 |||| || || || ||||| || || | || |||| ||| | ||| | | | Sbjct 14716 AACGAGAGTGATTGTCTTGAACGAAATCAAATT---CTAT--ATTTAACATTTCCTGATA 14770 Query 25811 GCCTGATT----AAAACTTTCTAAGAAAAAGCCACGTTCATCTCCGTAAACGTCAGGTTG 25866 || | || |||| |||| | || || || || |||| || |||| | ||| || Sbjct 14771 GCGTTTTTTCTCAAAAGTTTCCACAAAGAAACCCCGAGCATCACCAAAAACTTTAGGCTG 14830 Query 25867 AATGATCAACAAATCTTCGATTTTTGTTGCTTGAATC-----ATTTAATTCCCCTTTTAT 25921 ||| || | ||| | ||||| || | || | | ||| ||| ||| | | Sbjct 14831 AATAATTTTAACATCAGCAATTTTAGTATCAATAACCTGCATAATTATTTCTCCTCT-AC 14889 Query 25922 TTTAATTTAAGTAAATACTTACCGTAGTCTGTTTT--AC----TTAAAACCTCTCCAGA- 25974 |||| | | ||| | || || | |||||| || || | | | | | | Sbjct 14890 CAACATTT--GGAGATATTGCCCATATTGTGTTTTCGACAGTATTTTAGCTTGTGCTAAT 14947 Query 25975 ACTTTTTACAGAGTCTAAAGTAATCCATTCATTTTTAAAAGCAATCTCTTCCAGGCATGC 26034 |||| || ||| ||| | ||| | || | | |||||||||||||||||||| Sbjct 14948 ACTT----CA---TCTTTAGTGAGCCAACCTTTGCGATATGCAATCTCTTCCAGGCATGC 15000 Query 26035 AACCTTCATACCTTGTTGCTTCTCTATTGCATGAACAAATTGAGATGCTTCCATAAGACT 26094 || || | || ||| ||| || |||| ||| | || ||||| || || | | ||| Sbjct 15001 CACTTTAAATCCCTGTCGCTGTTCAATTGTATGGATGAACTGAGAGGCCTCAAGTAAACT 15060 Query 26095 TTCATGTGTTCCTGTATCCAGCCAAGTGAAACCTCTTCCTAG-TTTACAGACACGTAAAG 26153 ||||| || || || || ||||| | || |||| ||||| ||| || || | ||| Sbjct 15061 CTCATGAGTACCGGTGTCTAGCCATGCAAATCCTCGGCCTAGCTTTTCA-ACGTGCAAA- 15118 Query 26154 TCTTTTCT--TTCCAG-TACATCTCATTTATATCCGTAATCTCTAACTCCCCTCTAGCAG 26210 || || |||||| ||||| ||||||| |||||||||||||| || | |||| Sbjct 15119 --TTGCCTAGTTCCAGATACATTTCATTTAGCGTAGTAATCTCTAACTCACCACGTGCAG 15176 Query 26211 AAGGTTTAACGCTCTTAGCTTTCTGTATAACAGAATTATCGTAAAAGTACAAGCCTGTGA 26270 | |||||||| || || || | | || |||| ||||||||||| |||| || || | Sbjct 15177 ACGGTTTAACTCTTTTTGCCATTTCTACAACATTGTTATCGTAAAAATACAGCCCCGTAA 15236 Query 26271 TTGCGTAGTTGCtttttggtgtttttggtttttCTTCAATACTCACCACTGTACCTTCAG 26330 ||| |||| ||||||| ||||||||||| | | ||| | || | Sbjct 15237 CTGCCCAGTTCGATTTTGGTTCGGAAGGTTTTTCTTCGAGAGACACAGCGCGACTGTTTT 15296 Query 26331 AATCAAACTCAACAACACCAAATCTTTCAGGATCATTTACGTGATACCCAAAGATATTAG 26390 ||||||||| |||||||| || | ||| ||||| |||| ||||| ||||| | ||| Sbjct 15297 CATCAAACTCGACAACACCGAAACGTTCTGGATCCATTACCTGATAGCCAAACACTGTAG 15356 Query 26391 CTCCACCATTCTTTTCAATATGTTCTTTAGCAGAATCTAAAATGCTACCAAAACTCTGAC 26450 |||| ||| ||| ||| | ||| ||||| | | ||||| || | || Sbjct 15357 CTCC----GTCTGTTC-----GTTGCACAACAGTTTCTAACTTACGTCCAAAGCTTTCAC 15407 Query 26451 CAAAGAATAAA--TTATCACCTAGCACAAGTGCTACAG-AATCTTCACCAATAAAGTTCT 26507 ||| |||||| ||||| || || || | || |||| ||| || ||||| | | Sbjct 15408 CAA--AATAAATGTTATCCCCCAGAACCAACGC-ACAGCTGTCTCCATTGATAAATTCTT 15464 Query 26508 CACCAATAATAAACGCTTCTGCTAAACCTTTTGGGCTATCCTGTATTGCATACTGTAGGG 26567 ||||||| | ||| || | || | ||| | |||||| || || ||||| | Sbjct 15465 CACCAATCAAAAATGCCTGAGCAAGACCATCTGGGCTTGGTTGAATAGCATAACTAAATT 15524 Query 26568 AAATACCAAAAGAAGAACCATCACCTAGAAGATTTACAAAATTAATTTGATCTTCTGGTG 26627 | ||| || | ||||||||| || | | ||| | ||| || || | Sbjct 15525 TTACACCGAATTGACGACCATCACCCAGCAAACGCTTAAATCCAGGCATATCATCAGGAG 15584 Query 26628 TTGTAATTATTAGTATTTCCCTAATTCCAGAAAGCATTAGGACAGAGAGTGGATAATAAA 26687 | | ||| |||| ||| || | ||| |||| |||||| | ||||||| ||||||||||| Sbjct 15585 TCGAAATGATTAATATATCTCGAATGCCAGCAAGCATCAAAACAGAGATTGGATAATAAA 15644 Query 26688 TCATAGGTTTATCGTAAATTGGTAATAGTTG-TTTACTAACCCCTTTAGTAACTGGGTAA 26746 |||||||||||| || || ||||| | || ||| | |||| || |||| ||| || Sbjct 15645 CCATAGGTTTATCATATATGGGTAACAACTGCTTTGATGTCCCC-TTGGTAATTGGATAT 15703 Query 26747 AGCCTTGTTCCACTACCACCTGCTAAGATAATACCTTTCATA 26788 | | || || ||| || || | | ||||||||||||| Sbjct 15704 AAGCGAGTACCTGAACCGCCAGCAAGAACAATACCTTTCATA 15745 Score = 145 bits (160), Expect = 7e-30 Identities = 317/468 (68%), Gaps = 19/468 (4%) Strand=Plus/Plus Query 27115 GCGTGATCGTCAACGTATAACCAGTCTCTTACTTGAAGACCATTACCATAAACAGGGATT 27174 || ||||| || || || ||||| |||| | ||| |||| |||||| ||||| | Sbjct 16130 GCATGATCTTCTACATACAACCAATCTCGGATTTGCCCGCCATCACCATACACAGGAAGA 16189 Query 27175 GGTTTATGCATTAAGATATTTGTTATCGTTTTAGGTATTAGTTTTTCTGGATGATGATAT 27234 ||||| | ||| ||| || || || ||||| |||||||| ||| || Sbjct 16190 GGTTTCCCCTCTAATGCGTTTAAAATAATTAGGGGAATTAGCTTTTCTGGGAAATGGAAT 16249 Query 27235 GCTCCAAAATTATTTGAACAATTTGTTATAACTGTCGGAATACCATAAGTACGATGCCAC 27294 | |||| |||||||||| || || || | | ||| || | |||||| || | ||| Sbjct 16250 GGTCCATAATTATTTGAGCAGTTCGTAACGATTGTGGGTAAACCATATGTTCTTAACCAT 16309 Query 27295 GCTCTTACCAAATGATCGCTTGCAGCTTTAGATGCAGCATATGGACTACTTGGTTTATAA 27354 || | || ||||| || || | ||||| || |||| |||||| || || || |||| Sbjct 16310 GCACGGACTAAATGGTCACTAGACGCTTTTGAAGCAGAATATGGGCTGCTAGGCGAATAA 16369 Query 27355 GGATTCTGTTCTGTAAACGGATAATCTCCTTCTTCCAGATCACCATACACTTCATCTGTT 27414 | ||| ||| ||||| ||| ||| | | | |||||||||||| || ||||| ||| Sbjct 16370 GATGTCTTTTCAGTAAAAAGATCGTCTGTTCCATGCAGATCACCATAGACCTCATCAGTT 16429 Query 27415 GAAATATGATG-----GAACATT--TTAAGATTTGAT-TTAT-----CTCCCATTAA--A 27459 || |||||||| | | ||| || || ||| | || | | ||| ||| | Sbjct 16430 GATATATGATGAAAACGGAAATTACTTTTGAATTGCTCTTCTAGTTGATTCCAATAAGCA 16489 Query 27460 CGAACAGCTTCTAGAAGATTAAATGTCCCAACAATATTTGAATTTATAAAAACACTCGG- 27518 || || |||||| ||| || | || ||||||||||||| | |||||| | | ||| Sbjct 16490 CGTGCAACTTCTAAGAGAGTATAAGTTCCAACAATATTTGTTTCAATAAAAGC-CGCGGG 16548 Query 27519 -TGATGCTATTGAATTATCTACGTGACTCTCTGCTGCAAGATGCATTA 27565 || |||||||| ||| || ||||| ||||| || | |||||||| Sbjct 16549 CCCAT-CTATTGAACGATCAACATGACTTTCTGCAGCTAAATGCATTA 16595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475396186839840