Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq567 118 1e-21 >seq567 Length=338301 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || || |||||||| ||||| ||||||| | ||| ||| | ||||| | Sbjct 136099 AAATGAAGTGTAGATTCTTTCTGGATATTATAATCGCTAAGCGTACGACCA-TCCTCCAA 136157 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || |||| || | ||| || |||||||| || ||||||||||| ||| Sbjct 136158 TTGCTTCCCTGCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCCTTCCTTGTCTTGGAT 136217 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | |||||| | |||| | |||||||| || | |||| ||||| || Sbjct 136218 CTTAGACTTCACAGTCTCAACAGAGTCGTTTGGCTCCACATCCAGAGTGATCGTTTTTCC 136277 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || ||||| || ||||| ||||| Sbjct 136278 GGTGAGTGTTTTGACAAAAATTTGCAT 136304 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| ||||||||||||| | ||| ||| | ||||| ||||| || || Sbjct 137497 GTGGATTCCTTCTGGATATTGTAATCGCTTAAAGTGCGACCA-TCCTCAAGCTGTTTTCC 137555 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || | ||| || || || || || ||||||||||| ||||| || Sbjct 137556 TGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGAATCTTAGATTT 137615 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||||| | |||| |||||||||| || | || | || || ||||| | || Sbjct 137616 TACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTTACCGGTTAAGGT 137675 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 137676 TTTCACGAAAATCTGCAT 137693 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| || |||||||| || || || || | || ||| | | | || || || Sbjct 137716 AAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCA-TCTTCAAG 137774 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || |||| || | |||||| || || || || ||||||||||| ||| Sbjct 137775 TTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGAT 137834 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| |||||| | ||| ||||||| || |||| |||| ||||| || Sbjct 137835 CTTAGACTTGACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATTGTTTTACC 137894 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| ||||| Sbjct 137895 AGTGAGTGTTTTGACGAAAATTTGCAT 137921 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| || |||||||| || || || || | || ||| | | | || || || Sbjct 137032 AAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCA-TCTTCAAG 137090 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || |||| || | |||||| || || || || ||||||||||| ||| Sbjct 137091 TTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGAT 137150 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | |||||| | ||| ||||||| || |||| |||| ||||| || Sbjct 137151 CTTAGACTTAACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATTGTTTTACC 137210 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| ||||| Sbjct 137211 AGTGAGTGTTTTGACGAAAATTTGCAT 137237 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| ||||| || ||| | ||| ||| | ||||| || ||||| || Sbjct 137953 GTAGATTCTTTCTGGATATTATAGTCGTTAAGAGTGCGACCA-TCCTCAAGTTGCTTTCC 138011 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| | ||| ||||| || || || ||||||||||| ||||| || Sbjct 138012 TGCGAAAATGAGTCTCTGTTGGTCTGGCGGAATACCTTCCTTGTCTTGAATCTTAGATTT 138071 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || ||| |||| ||| ||||| || |||| || | |||||||| |||| || Sbjct 138072 GACGGTCTCGACCGAATCGTCAGGCTCTACATCGAGAGTTATAGTTTTGCCAGTCAACGT 138131 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 138132 CTTCACAAATATCTGCAT 138149 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || ||||| ||||| || || | || ||| ||| || |||||||| || Sbjct 136336 GTAGATTCCTTCTGGATATTATAGTCACTCAGAGTGCGGCCGTCTTCAAGCTGCTTACCG 136395 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || |||| || | ||| || || || || || |||||||| || ||||| ||| Sbjct 136396 GCAAAAATCAGTCTCTGTTGATCAGGGGGAATTCCTTCCTTATCTTGAATCTTAGACTTC 136455 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | |||||| | |||| |||||||||| || | || | || || ||||| | ||| Sbjct 136456 ACAGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTTACCGGTTAAGGTT 136515 Query 133644 TTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 136516 TTCACGAAAATCTGCAT 136532 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || || ||||||| | ||| ||| | ||||| | || || || Sbjct 137269 GTAGATTCTTTCTGGATGTTATAATCGCTAAGTGTGCGACCA-TCCTCCAATTGTTTCCC 137327 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || | ||| || || ||||| || ||||||||||| ||| || ||| Sbjct 137328 GGCAAAAATCAGTCTCTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGGATTTTAGACTT 137387 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | ||| || | || ||||||| || || | ||||| |||||||| || || || Sbjct 137388 TACAGTCTCGACAGAATCATTGGGCTCAACATCAAGGGTGATCGTTTTGCCAGTAAGTGT 137447 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || || || ||||| Sbjct 137448 TTTAACAAAGATTTGCAT 137465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483386011830680