Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq567 114 8e-21 >seq567 Length=338301 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| || | ||||| || ||||| ||||| || ||||| |||||| Sbjct 137238 ACCACCTCTCAATCGAAGAACCAAGTGGAGAGTAGATTCTTTCTGGATGTTATAATCGCT 137297 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||||| | || ||||||||||| ||||||||||||| | ||| ||||| | || Sbjct 137298 AAGTGTGCGACCATCCTCCAATTGTTTCCCGGCAAAAATCAGTCTCTGTTGATCAGGAGG 137357 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||||| | | ||| || || | || | | || | Sbjct 137358 AATTCCTTCCTTGTCTTGGATTTT-AGACTTTACAGTCTCGACAGAATCATTGGGCTCAA 137416 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||||||||| || || | ||||| |||||||| |||||| Sbjct 137417 CATCAAGGGTGATCGTTTTGCCAGTAAGTGTTTTAACAAAGATTTGCATA 137466 Score = 84.2 bits (92), Expect = 1e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 33537 TAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTC 33596 ||| || ||||| || || ||||| || || || |||||| || || || | || Sbjct 136092 TAAAACTAAATGAAGTGTAGATTCTTTCTGGATATTATAATCGCTAAGCGTACGACCATC 136151 Query 33597 GTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 |||||||| || || |||||||||| | ||| ||||| | || | ||||| ||||| Sbjct 136152 CTCCAATTGCTTCCCTGCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCCTTCCTTGTC 136211 Query 33657 GGCAATTTTCTGTTTCAACATAGTCA-CGGTGTCGCTTGATTCCACGTCAACCGTGATCG 33715 || || |||| || ||| | | |||| ||| ||||| || | ||||||| Sbjct 136212 TTGGATCTTAGACTTCA-CAGTCTCAACAGAGTCGTTTGGCTCCACATCCAGAGTGATCG 136270 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || || | ||||| ||||| || |||||| Sbjct 136271 TTTTTCCGGTGAGTGTTTTGACAAAAATTTGCATA 136305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328680936997440