Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq567 89.7 5e-13 >seq567 Length=338301 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | | || ||||| || ||||| ||||| |||| || || |||||| Sbjct 137028 AACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCATCTTC 137087 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || || || |||| | | || || | ||| ||||| || || || ||||| || || Sbjct 137088 AAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTGTCCTG 137147 Query 132034 AATTTTTTGTTTCAACTGT-TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092 || || || ||| || || |||| || | ||||| || |||| || | |||| Sbjct 137148 GATCTTAGACTT-AACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATTGTTT 137206 Query 132093 TACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || ||||| | |||||| ||||| Sbjct 137207 TACCAGTGAGTGTTTTGACGAAAATTTGCAT 137237 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || || || || ||||| |||| || || ||||| ||||| ||||||| | Sbjct 136339 GATTCCTTCTGGATATTATAGTCACTCAGAGTGCGGCCGTCTTCAAGCTGCTTACCGGCA 136398 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | ||||||||| || || || ||||| ||||| ||| || |||| | Sbjct 136399 AAAATCAGTCTCTGTTGATCAGGGGGAATTCCTTCCTTATCTTGAATCTTAGACTTCA-C 136457 Query 132050 TGT-TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108 || || |||| ||| | |||||||| || | || | || ||||| || | ||||| Sbjct 136458 AGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTTACCGGTTAAGGTTTT 136517 Query 132109 TATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 136518 CACGAAAATCTGCAT 136532 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | | || ||||| || ||||| ||||| |||| || || |||||| Sbjct 137712 AACCAAGTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCATCTTC 137771 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || || || |||| | | || || | ||| ||||| || || || ||||| || || Sbjct 137772 AAGTTGCTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTGTCCTG 137831 Query 132034 AATTTTTTGTTTCAACTGT-TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092 || || || | | || || |||| || | ||||| || |||| || | |||| Sbjct 137832 GATCTTAGACTTGA-CAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATTGTTT 137890 Query 132093 TACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || ||||| | |||||| ||||| Sbjct 137891 TACCAGTGAGTGTTTTGACGAAAATTTGCAT 137921 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | || || || || || ||||| ||||| | || || ||| || Sbjct 137484 AACCAAGTGGAGAGTGGATTCCTTCTGGATATTGTAATCGCTTAAAGTGCGACCATCCTC 137543 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 |||||||| || | | || || | |||||||||||| || || ||||| || || Sbjct 137544 AAGCTGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCCTTGTCTTG 137603 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || ||| | | || |||| ||| | |||||||| || | || | || || Sbjct 137604 AATCTTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTT 137663 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| || | ||||| | |||||||||||| Sbjct 137664 ACCGGTTAAGGTTTTCACGAAAATCTGCAT 137693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476576901866520