Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq567 98.7 9e-16 >seq567 Length=338301 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | || || || ||||| | ||| || || || || || |||||| | Sbjct 136078 CCACCACGAAGTCTTAAAACTAAATGAAGTGTAGATTCTTTCTGGATATTATAATCG-CT 136136 Query 35570 AAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 ||| || || | || |||| ||||| || ||||| |||| | ||| || || | ||| Sbjct 136137 AAGCGTACGACCATCCTCCAATTGCTTCCCTGCAAAAATCAGTCTCTGTTGATCGGGAGG 136196 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 || | |||||||| |||||| ||||| ||| | || | |||| | | ||||| Sbjct 136197 AATTCCTTCCTTGTCTTGGATCTTAGACTTCACAGTCTCAACAGAGTCGTTTGGCTCCAC 136256 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||||||||| || || | ||||| ||||| || ||||| Sbjct 136257 ATCCAGAGTGATCGTTTTTCCGGTGAGTGTTTTGACAAAAATTTGCAT 136304 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||||| | || || || | ||| ||||| || || || || || | Sbjct 136306 CCACCCCTCAACCTAAGAACTAAGTGGAGAGTAGATTCCTTCTGGATATTATAGTCACTC 136365 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || ||||||||||| ||||| |||| | ||| || || | ||| Sbjct 136366 AGAGTGCGGCCGTCTTCAAGCTGCTTACCGGCAAAAATCAGTCTCTGTTGATCAGGGGGA 136425 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || ||||| ||||| ||| | || | |||| | | ||||| Sbjct 136426 ATTCCTTCCTTATCTTGAATCTTAGACTTCACAGTCTCAACAGAGTCGTTGGGCTCCACA 136485 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| || || || ||||| || || |||||||| || |||||||||| Sbjct 136486 TCCAGAGTAATTGTCTTACCGGTTAAGGTTTTCACGAAAATCTGCATTC 136534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450761159765560