Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq567 140 3e-28 >seq567 Length=338301 Score = 140 bits (154), Expect = 3e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||||||||| || || ||||| |||| | ||| || || || ||||| Sbjct 137490 GTGGAGAGTGGATTCCTTCTGGATATTGTAATCGCTTAAAGTGCGACCATCCTCAAGCTG 137549 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| ||||| ||||||| | ||| ||||| || || || ||||| || |||||||| || Sbjct 137550 TTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGAATCTT 137609 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||| |||| || | | |||| | ||||| || |||||||| || |||||||| Sbjct 137610 AGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTTACCGGT 137669 Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714 ||| ||||| |||||||| |||||| Sbjct 137670 TAAGGTTTTCACGAAAATCTGCATT 137694 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||| || || || ||||| | | ||| | ||| || ||||| Sbjct 136329 GTGGAGAGTAGATTCCTTCTGGATATTATAGTCACTCAGAGTGCGGCCGTCTTCAAGCTG 136388 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || |||||||||| | ||| ||||| || || || ||||| || |||||||| || Sbjct 136389 CTTACCGGCAAAAATCAGTCTCTGTTGATCAGGGGGAATTCCTTCCTTATCTTGAATCTT 136448 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || | || | | |||| | ||||| || |||||||| || |||||||| Sbjct 136449 AGACTTCACAGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTTACCGGT 136508 Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714 ||| ||||| |||||||| |||||| Sbjct 136509 TAAGGTTTTCACGAAAATCTGCATT 136533 Score = 107 bits (118), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 ||||| ||||| ||||||| | ||| ||||| || || || ||||| || |||||||| Sbjct 136864 TGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGAATC 136923 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||| |||| || | | |||| | ||||| || |||||||| || |||||| Sbjct 136924 TTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTTACCG 136983 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| ||||| |||||||| |||||| Sbjct 136984 GTTAAGGTTTTCACGAAAATCTGCATT 137010 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||| || || ||||| ||||| | | ||| | || || || || Sbjct 137718 GTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCATCTTCAAGTTG 137777 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || |||||||||| | ||||||||| || || || ||||| || || || || || Sbjct 137778 CTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTT 137837 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| | || | | ||| | || || |||||||| || |||||||| || Sbjct 137838 AGACTTGACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATTGTTTTACCAGT 137897 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| |||||||||||||| Sbjct 137898 GAGTGTTTTGACGAAAATTTGCAT 137921 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || ||||| || || || || || |||| || || || || || | || Sbjct 136102 TGAAGTGTAGATTCTTTCTGGATATTATAATCGCTAAGCGTACGACCATCCTCCAATTGC 136161 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || ||||||||||||| | ||| |||||||| || || ||||| || ||||| || || Sbjct 136162 TTCCCTGCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCCTTCCTTGTCTTGGATCTTA 136221 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || | || | | |||| | ||||| || ||||| || ||||| ||||| Sbjct 136222 GACTTCACAGTCTCAACAGAGTCGTTTGGCTCCACATCCAGAGTGATCGTTTTTCCGGTG 136281 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || ||||||||||| Sbjct 136282 AGTGTTTTGACAAAAATTTGCAT 136304 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||| || || ||||| ||||| | | ||| | || || || || Sbjct 137034 GTGGAGGGTAGATTCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCATCTTCAAGTTG 137093 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || |||||||||| | ||||||||| || || || ||||| || || || || || Sbjct 137094 CTTTCCGGCAAAAATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTT 137153 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || | || | | ||| | || || |||||||| || |||||||| || Sbjct 137154 AGACTTAACAGTCTCAACAGAGTCATTGGGCTCAACATCGAGAGTGATTGTTTTACCAGT 137213 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| |||||||||||||| Sbjct 137214 GAGTGTTTTGACGAAAATTTGCAT 137237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505362030267640