Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4076 154 2e-32 >seq4076 Length=468004 Score = 154 bits (170), Expect = 2e-32 Identities = 436/654 (67%), Gaps = 37/654 (6%) Strand=Plus/Minus Query 110738 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 110797 ||||| || || || ||||| | ||||| || || ||||| | |||| |||||| Sbjct 422214 TCATTGTTTCCAAATATTTGAGATGTGGATGCAGTGGGCATACAAGTAGTCAATAGACTG 422155 Query 110798 TTACGAAGACCCTTCTCCTTGA--TGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT 110855 ||||| | || | | |||| | |||||| | ||||||| || | | | || Sbjct 422154 TTACGTAAGCCATATT--TTGAAATATTTTCCTTCAAGCCATCCCAATCCCA-TAAATCT 422098 Query 110856 --TGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTC 110913 |||| | || | ||||||| || | ||||| | |||||| ||| || || || || Sbjct 422097 GATGGTGTTAC-TCCCCACATATCGTATTGAAGAATCCCTTGACTCGCTGGGGAGCCTTC 422039 Query 110914 AAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTG 110973 | | |||||||| | ||| || || |||||| || | ||| |||| || || Sbjct 422038 ATAAGTTTCATAAGGACCATGCTTTTGGCTCAATTCGCATGAAGACTCAAGGGCAGCATG 421979 Query 110974 ATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTA 111033 ||| || || ||||| || ||| | || | |||||| |||||||| || | || Sbjct 421978 ATAGATTGTCTCAAAAATTTTTTTATTAAGTTCATGGGCTTCCTCTGAATCGAAAGGATA 421919 Query 111034 GCGGCACAAAATAAATAC--ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 111091 || || || || |||| ||| || | |||||||||||| | ||||| ||||| || Sbjct 421918 ACG-CATAAT-TACATACGCATCAGCCAAACCTTGAACACCTATCCCAATTGGTCTATGA 421861 Query 111092 CGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGG 111148 || ||||||| ||| ||| ||| || || ||||| | ||||||||| | Sbjct 421860 CGACTATTAGATCTTC---CAGCTTCAGGAACAGGGTAAAACGAGCGATCAATGACTTTG 421804 Query 111149 TTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGA 111208 || | ||| |||| || || || ||||| |||||||| | ||| || ||| || Sbjct 421803 TTCATATTAACAGTAATGATTTTAGTAATTTCGTGAAGTTTCTTGAAATTGAAGGTGGGA 421744 Query 111209 GTC-------TCTTCATTGACA---TACTTTGGAAGGGCGATTGATGCCAAATTGCAAAC 111258 | |||| |||| || || || ||||| | || || ||||||||| || Sbjct 421743 TTTGATAATTTCTT-ATTGTCAATATATTTAGGAAGCGAAATGGAACACAAATTGCACAC 421685 Query 111259 AGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC---TT 111315 ||| || |||| ||| |||| || | ||| || || |||| || ||| || Sbjct 421684 AGCAGTTTCATTGGGATCGCTGTATTCGACAATCTCGGTGCATAGATT---ACTTGATTT 421628 Query 111316 AATCGTCCCCAAA-TTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGA 111368 || | | |||| |||||||||||||| ||||||||||| ||||| ||||||| Sbjct 421627 GAT-GACTCCAAGGTTCTTTTGGTTACTTTTCTTGTTGCAGGCATCTTTGTAGA 421575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627986805247200