Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq567 114 8e-21 >seq567 Length=338301 Score = 114 bits (126), Expect = 8e-21 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TGAAAGTGTTCGCTCGTCTT 34555 ||||| ||||||||| ||||| || || || ||||| | |||||| || | || | Sbjct 137485 ACCAAGTGGAGAGTGGATTCCTTCTGGATATTGTAATCGCTTAAAGTG--CGACCATCCT 137542 Query 34556 CAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTG 34615 |||| ||||| || || || || | | |||||| || || || | ||| ||||||||| Sbjct 137543 CAAGCTGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCCTTGTCTT 137602 Query 34616 TGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 ||||| ||||| || || | ||| | | |||||| |||| || || || | Sbjct 137603 GAATCTTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCT 137662 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||||||| |||||||| ||||||||||| Sbjct 137663 TACCGGTTAAGGTTTTCACGAAAATCTGCAT 137693 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || || |||||||| ||||| || || ||||| || || || || |||||||| Sbjct 136324 ACTAAGTGGAGAGTAGATTCCTTCTGGATATTATAGTCACTCAGAGTGCGGCCGTCTTCA 136383 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || ||||||||||| || | | |||||| || || || | ||| ||||| ||| Sbjct 136384 AGCTGCTTACCGGCAAAAATCAGTCTCTGTTGATCAGGGGGAATTCCTTCCTTATCTTGA 136443 Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 ||||| || | | || | ||| | | |||||| |||| || || || ||| Sbjct 136444 ATCTTAGACTTCACAGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTTA 136503 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||||| |||||||| ||||||||||| Sbjct 136504 CCGGTTAAGGTTTTCACGAAAATCTGCAT 136532 Score = 84.2 bits (92), Expect = 1e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 34561 TGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATC 34620 ||||| || || || || | | |||||| || || || | ||| ||||||||| ||| Sbjct 136864 TGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCCTTGTCTTGAATC 136923 Query 34621 TTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCG 34680 || ||||| || || | ||| | | |||||| |||| || || || |||||| Sbjct 136924 TTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTTACCG 136983 Query 34681 GTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| |||||||| ||||||||||| Sbjct 136984 GTTAAGGTTTTCACGAAAATCTGCAT 137009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314707517489381