Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq567 122 8e-23 >seq567 Length=338301 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| | ||||| ||| | |||||||| || ||||| || | Sbjct 137693 ATGCAGATTTTCGTGAAAACCTTAACCGGTAAGACAATTACTCTGGATGTGGAGCCCAAC 137634 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| |||||| ||| ||| || ||||||||||| ||||| || || || |||||| Sbjct 137633 GACTCTGTTGAGACGGTAAAATCTAAGATTCAAGACAAGGAAGGAATTCCCCCAGATCAA 137574 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || ||||| | || || || || | ||||||||| Sbjct 137573 CAGAGACTGATTTTCGCAGGAAAACAGCTTGAGGATGGTCGCACTTTAAGCGATTACAAT 137514 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | || |||||| | | ||| ||||||| || Sbjct 137513 ATCCAGAAGGAATCCACTCTCCACTTGGTTCTTAGGTTGAGGGGTGGTAT 137464 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || ||||| || | || ||||| || ||||| || | Sbjct 136304 ATGCAAATTTTTGTCAAAACACTCACCGGAAAAACGATCACTCTGGATGTGGAGCCAAAC 136245 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| |||||| || || || || |||||||| ||||| || || ||||||||| Sbjct 136244 GACTCTGTTGAGACTGTGAAGTCTAAGATCCAAGACAAGGAAGGAATTCCTCCCGATCAA 136185 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || |||||||| || || || || |||||| || Sbjct 136184 CAGAGACTGATTTTTGCAGGGAAGCAATTGGAGGATGGTCGTACGCTTAGCGATTATAAT 136125 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 || || || || || || | ||||| ||||| Sbjct 136124 ATCCAGAAAGAATCTACACTTCATTTAGTTTT 136093 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || ||||| | || || ||||| || || || Sbjct 137465 ATGCAAATCTTTGTTAAAACACTTACTGGCAAAACGATCACCCTTGATGTTGAGCCCAAT 137406 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || || | |||| || || ||||| |||||||| ||||| || || || |||||| Sbjct 137405 GATTCTGTCGAGACTGTAAAGTCTAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAA 137346 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| ||||||||||| || || || || |||||| ||| Sbjct 137345 CAGAGACTGATTTTTGCCGGGAAACAATTGGAGGATGGTCGCACACTTAGCGATTATAAC 137286 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || | || |||||| | || ||| | ||||| || Sbjct 137285 ATCCAGAAAGAATCTACTCTCCACTTGGTTCTTCGATTGAGAGGTGGTAT 137236 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || |||| ||||| |||| ||||| || || || || | Sbjct 138149 ATGCAGATATTTGTGAAGACGTTGACTGGCAAAACTATAACTCTCGATGTAGAGCCTGAC 138090 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||| | |||| |||||| || ||||||||||| ||||| || || || || ||| Sbjct 138089 GATTCGGTCGAGACCGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCGCCAGACCAA 138030 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || ||| | || || || || || ||| || || Sbjct 138029 CAGAGACTCATTTTCGCAGGAAAGCAACTTGAGGATGGTCGCACTCTTAACGACTATAAT 137970 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || | || |||||| | || ||| | ||||| || Sbjct 137969 ATCCAGAAAGAATCTACTCTCCACTTGGTTCTTCGATTGAGAGGTGGGAT 137920 Score = 102 bits (112), Expect = 7e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| | ||||| ||| | |||||||| || ||||| || | Sbjct 137009 ATGCAGATTTTCGTGAAAACCTTAACCGGTAAGACAATTACTCTGGATGTGGAGCCCAAC 136950 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| |||||| ||| ||| || ||||||||||| ||||| || || || |||||| Sbjct 136949 GACTCTGTTGAGACGGTAAAATCTAAGATTCAAGACAAGGAAGGAATTCCCCCAGATCAA 136890 Query 27108 CAGCGTTTAATATACGCCGGCAAACA 27133 ||| | | || | ||| || ||||| Sbjct 136889 CAGAGACTGATTTTCGCAGGAAAACA 136864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434887102184640