Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3622 123 2e-23 >seq3622 Length=296610 Score = 123 bits (136), Expect = 2e-23 Identities = 222/318 (70%), Gaps = 5/318 (2%) Strand=Plus/Minus Query 4380 CGGTCAGCTACAAATTCTATATACTGGCTCATGAGT-TCGCAGTTAATTCCAATTAATCT 4438 || ||||| ||||| || ||||| | || ||| | ||| || ||||| || || || Sbjct 278496 CGATCAGCGACAAACTCAATATATTTGCACATCTCAATGGCA-TTCATTCCGATCAAACT 278438 Query 4439 CACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498 ||||||||| || | ||||||||||||| ||| || || || || || || || Sbjct 278437 CACAGGTAGTGCTTCAGTCAAAAACTCTTTTTCGATTTCAACTGCATCCACAATAAT-TC 278379 Query 4499 TTTTATTTT-ATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAAT 4557 ||| | | || |||||||| ||| | | ||||| || || || |||| Sbjct 278378 TTTGAACCAGAGATTGTGATGGTTTCACGGTTAAATGACTAAACATCAAGCATGCGAAAT 278319 Query 4558 CACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTA 4617 || ||| | || || || ||||| || ||||| ||| || | || || ||||||| Sbjct 278318 CAGTATGAAGTCCCTCATCCCTGCTGATGAGTTCATTACTGAAGGCCAAGCCAGGCATTA 278259 Query 4618 AACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTA 4677 |||| | |||||| | |||||| || || |||||||| ||||||||||| || ||||| | Sbjct 278258 AACCACGCTTTTTTAACCAAAAAATGGCAGCAAATGAACCAGAAAAGAAAATTCCTTCGA 278199 Query 4678 CGGCGGCAAACGCTACTA 4695 | | ||||| || |||| Sbjct 278198 CAG-AGCAAAGGCAACTA 278182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427019636732081